Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2213
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   5.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   7.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = +2

Query: 122 VHRSNESFSPKVTRHPDSARDIVDSQRH 205
           VH++  +  P +   PD   D+ +   H
Sbjct: 106 VHQAINTCQPSIPLEPDFTSDVTERDNH 133


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = -1

Query: 202 SLGVDYITSA--VRVASNLRRKRFVRSVNSA*LSLRSGLRAVLGASTPALEL 53
           ++G+ ++  A  V+VA        ++  N + LSLRS L A +  +TP + +
Sbjct: 80  AVGLTFLLGAILVQVAIICEGVMNIQKDNKSYLSLRSLLSADVAVATPLISM 131


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 406 FPNST*RES*QKSIDRSKTEEFDQDIDYDNNKT 504
           F N   R++  +S +  +T+ +  D+D  +NKT
Sbjct: 49  FDNDERRQAAIQSGEYDRTKNYPLDVDQWHNKT 81


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/83 (15%), Positives = 36/83 (43%)
 Frame = +2

Query: 194 SQRHADDYDFKKQISTYVDNDDYSETQSIRNRETNVSSKIDRNTDDNYSRTSRYETKVNK 373
           + ++AD+ +  KQ     +++  ++ +   NR+ +     +R  D+  +   +   K N 
Sbjct: 443 NNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQND 502

Query: 374 TIIDSKVENDYSQIQRNEKVDRN 442
              +   +ND  +    +  ++N
Sbjct: 503 NKQNGNRQNDNKRNGNRQNDNQN 525


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 213 ITISRNKYLHTST 251
           + I+RNK +HT+T
Sbjct: 76  VVIARNKSMHTAT 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,745
Number of Sequences: 438
Number of extensions: 3034
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)