Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2209
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   2.7  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   4.7  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    21   4.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   4.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   4.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   6.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   8.2  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 126 PILEYPISFINTY 164
           P+L YP ++IN+Y
Sbjct: 34  PMLPYPQNYINSY 46


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 247 VDCKPIHGGAIFL 285
           V CKP H G+ FL
Sbjct: 54  VKCKPYHVGSKFL 66


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 247 VDCKPIHGGAIFL 285
           V CKP H G+ FL
Sbjct: 69  VKCKPYHVGSKFL 81


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 247 VDCKPIHGGAIFL 285
           V CKP H G+ FL
Sbjct: 287 VKCKPYHVGSKFL 299


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 247 VDCKPIHGGAIFL 285
           V CKP H G+ FL
Sbjct: 287 VKCKPYHVGSKFL 299


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 5/23 (21%), Positives = 15/23 (65%)
 Frame = +3

Query: 303 TDEYTAHLMVRSYRRPWTVSKCQ 371
           +++  AH+++ +  +P+   KC+
Sbjct: 231 SNQLKAHVLIHTNEKPFECDKCR 253


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 312 YTAHLMVRSYRRPWTVSKC 368
           YT H+    +  P+T + C
Sbjct: 486 YTIHMGYHGFHNPFTCNMC 504


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 309 RLSTRTIKKEDGPSMY 262
           RLST T  K D PS +
Sbjct: 124 RLSTTTQNKNDDPSYW 139


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 287 KRKMAPPCIGLQST 246
           +RKM PP + L ST
Sbjct: 827 ERKMEPPGVPLNST 840


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,532
Number of Sequences: 336
Number of extensions: 2313
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)