Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2209
         (410 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   4.3  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   4.3  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   5.7  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +2

Query: 320  PLDGKKLPSPMDRQ-QMPEAESSRCLPV 400
            PL G  +P PMDR  +   AE S   P+
Sbjct: 1289 PLAGAAVPKPMDRSLRSILAEQSELSPI 1316


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 326 DGKKLPSPMDRQQMPEAESSRCLPVSS 406
           +G +LPS   +QQ+  A SS  L  SS
Sbjct: 170 NGGELPSNKQQQQLTSASSSNQLSNSS 196


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 356 GPWATVTSYHQVGRILVCL 300
           GP  T   YH+VGR +  L
Sbjct: 288 GPQKTDLDYHEVGRSIATL 306


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,110
Number of Sequences: 2352
Number of extensions: 9317
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)