Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2209
         (410 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z85987-1|CAI42222.1|  961|Homo sapiens FYVE, RhoGEF and PH domai...    29   7.9  
U11690-1|AAA57004.1|  961|Homo sapiens FGD1 protein.                   29   7.9  
EF219141-1|ABN09670.1|  574|Homo sapiens sorting nexin 30 protein.     29   7.9  
BC034530-1|AAH34530.1|  961|Homo sapiens FYVE, RhoGEF and PH dom...    29   7.9  
BC018775-1|AAH18775.1|  574|Homo sapiens SH3 and PX domain conta...    29   7.9  

>Z85987-1|CAI42222.1|  961|Homo sapiens FYVE, RhoGEF and PH domain
           containing 1 (faciogenital dysplasia) protein.
          Length = 961

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
 Frame = +2

Query: 290 IVLVDRRVYGPLDGKK----LPSPMDRQ---QMPEAESSRCL 394
           IV  DR V GP  G      LP P  +    Q+PE E+SRCL
Sbjct: 224 IVASDRPVPGPSPGPPEPVMLPQPTSQPPVPQLPEGEASRCL 265


>U11690-1|AAA57004.1|  961|Homo sapiens FGD1 protein.
          Length = 961

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
 Frame = +2

Query: 290 IVLVDRRVYGPLDGKK----LPSPMDRQ---QMPEAESSRCL 394
           IV  DR V GP  G      LP P  +    Q+PE E+SRCL
Sbjct: 224 IVASDRPVPGPSPGPPEPVMLPQPTSQPPVPQLPEGEASRCL 265


>EF219141-1|ABN09670.1|  574|Homo sapiens sorting nexin 30 protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 7   LLRWVDELTAHLVLSGYCGFK 69
           L+ W+D +T+H VLS Y GF+
Sbjct: 310 LILWMDHMTSHPVLSQYEGFQ 330


>BC034530-1|AAH34530.1|  961|Homo sapiens FYVE, RhoGEF and PH domain
           containing 1 (faciogenital dysplasia) protein.
          Length = 961

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
 Frame = +2

Query: 290 IVLVDRRVYGPLDGKK----LPSPMDRQ---QMPEAESSRCL 394
           IV  DR V GP  G      LP P  +    Q+PE E+SRCL
Sbjct: 224 IVASDRPVPGPSPGPPEPVMLPQPTSQPPVPQLPEGEASRCL 265


>BC018775-1|AAH18775.1|  574|Homo sapiens SH3 and PX domain
           containing 3 protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 7   LLRWVDELTAHLVLSGYCGFK 69
           L+ W+D +T+H VLS Y GF+
Sbjct: 310 LILWMDHMTSHPVLSQYEGFQ 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,784,905
Number of Sequences: 237096
Number of extensions: 1387443
Number of successful extensions: 2327
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2327
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)