Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2209
         (410 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p pro...    33   0.15 
AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-P...    33   0.15 
AE014296-1272|AAO41272.1|  480|Drosophila melanogaster CG16992-P...    28   5.5  

>BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p
           protein.
          Length = 392

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 278 SSFFIVLVDRRVYGPLDGKKLPSPMDRQQMPEAESSRCLPVSSH 409
           SS F+V V   V   L   + PSP     +P+ +S R LP+++H
Sbjct: 36  SSLFVVCVASLVATTLGRPEPPSPYSYHGLPQQQSQRALPLNAH 79


>AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-PA
           protein.
          Length = 360

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 278 SSFFIVLVDRRVYGPLDGKKLPSPMDRQQMPEAESSRCLPVSSH 409
           SS F+V V   V   L   + PSP     +P+ +S R LP+++H
Sbjct: 4   SSLFVVCVASLVATTLGRPEPPSPYSYHGLPQQQSQRALPLNAH 47


>AE014296-1272|AAO41272.1|  480|Drosophila melanogaster CG16992-PA
           protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +2

Query: 113 YYCLTNFRISHIIY*YI-----LTNDFYYEGITSRYRIKPEKYVTLSNYWWIVNLYMEGP 277
           YY LT+  +    + Y      +  D Y       + IKP+   TLS  W+ ++  +E P
Sbjct: 128 YYLLTDMIVLRYEFRYCEKVVSVQEDQYKLYENGSFMIKPDVNWTLSKQWYCLHPRLEDP 187

Query: 278 SSFFIV 295
           +S +I+
Sbjct: 188 NSIWIL 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,121,615
Number of Sequences: 53049
Number of extensions: 377341
Number of successful extensions: 705
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)