Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2209
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical pr... 29 0.99
AF077537-3|AAC26271.1| 186|Caenorhabditis elegans Hypothetical ... 28 2.3
AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical ... 28 3.0
AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical ... 28 3.0
U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical pr... 27 5.3
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 27 7.0
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 27 7.0
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 26 9.2
AL032640-4|CAA21642.1| 369|Caenorhabditis elegans Hypothetical ... 26 9.2
AF003148-2|AAR25645.1| 400|Caenorhabditis elegans Hypothetical ... 26 9.2
AF003148-1|AAR25644.1| 432|Caenorhabditis elegans Hypothetical ... 26 9.2
>Z77661-2|CAB01184.4| 265|Caenorhabditis elegans Hypothetical
protein F40G12.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 0.99
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 272 PPCIGLQSTSNCSKLHIFQA*FYNVT*YLHSKS 174
PP ++S NC K+H + F+N +L SK+
Sbjct: 205 PPSFLVKSQENCEKVHFLSSNFWNCLQHLKSKN 237
>AF077537-3|AAC26271.1| 186|Caenorhabditis elegans Hypothetical
protein F16G10.3 protein.
Length = 186
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 158 YILTNDFYYEGITSRYRIKPEKYVTLSNYWWIVN 259
Y+ + Y G + Y K K T+ YWW++N
Sbjct: 146 YVKDGNMAYTGPDASYNGKKSKVTTI--YWWVIN 177
>AC006769-9|AAF60585.2| 779|Caenorhabditis elegans Hypothetical
protein Y45G12C.11 protein.
Length = 779
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 137 ISHIIY*YILTNDFYYEGITSRYRIKPEKYVTLSNYWWIV 256
+SH+ Y N + EG +S + I P V N W +V
Sbjct: 26 LSHLYSSYYPENFTFKEGFSSHFAISPVSEVKAGNKWIVV 65
>AC006645-2|AAF39844.2| 796|Caenorhabditis elegans Hypothetical
protein F56A4.6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 137 ISHIIY*YILTNDFYYEGITSRYRIKPEKYVTLSNYWWIV 256
+SH+ Y N + EG +S + I P V N W +V
Sbjct: 26 LSHLYSSYYPENFTFKEGFSSHFAISPVSEVKAGNKWIVV 65
>U80445-1|AAB37794.1| 855|Caenorhabditis elegans Hypothetical
protein C50F2.3 protein.
Length = 855
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 232 FEQLLVDCKPIHGGAIFLFY 291
FEQ L +C P H IFL Y
Sbjct: 584 FEQCLENCPPTHAKYIFLLY 603
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 266 MEGPSSFFIVLVDRRVYGP-LDGKKLPSPMDRQQMPEAESSRCLPVSSH 409
ME F + + +Y P +DG+ LP P+D + + S + V+ H
Sbjct: 83 MEKLQGFQLPITGYFIYQPNIDGEFLPKPLDDLRRESPKKSMMIGVAEH 131
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 266 MEGPSSFFIVLVDRRVYGP-LDGKKLPSPMDRQQMPEAESSRCLPVSSH 409
ME F + + +Y P +DG+ LP P+D + + S + V+ H
Sbjct: 299 MEKLQGFQLPITGYFIYQPNIDGEFLPKPLDDLRRESPKKSMMIGVAEH 347
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 146 YGIF*NWLNNNKILHCVFC-TILRKQHLKPQ 57
Y I+ NN ++C C ++ ++HLKPQ
Sbjct: 261 YTIYTGKFNNTNKVYCTSCNSVTSEKHLKPQ 291
>AL032640-4|CAA21642.1| 369|Caenorhabditis elegans Hypothetical
protein Y43F8A.4 protein.
Length = 369
Score = 26.2 bits (55), Expect = 9.2
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +2
Query: 74 VFLILYRK-RNEVFYYCLTNFRISHIIY*YIL----TNDFYYEGITSRYRIKPEKYVTLS 238
+F++L + R + + IS I Y + T +F GI + R P+K L+
Sbjct: 52 IFILLNKSMRRQATNVLIIGIAISDIFYLFYYVEGGTREFLENGIPGKCR--PKKTEFLA 109
Query: 239 NYWWIVNLYME 271
Y WIV ++ +
Sbjct: 110 YYIWIVTIFKD 120
>AF003148-2|AAR25645.1| 400|Caenorhabditis elegans Hypothetical
protein F32B5.6b protein.
Length = 400
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 330 VRSYRRPWTVSKCQRQ 377
V S++ PWT+ CQRQ
Sbjct: 17 VISFQHPWTLKVCQRQ 32
>AF003148-1|AAR25644.1| 432|Caenorhabditis elegans Hypothetical
protein F32B5.6a protein.
Length = 432
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 330 VRSYRRPWTVSKCQRQ 377
V S++ PWT+ CQRQ
Sbjct: 17 VISFQHPWTLKVCQRQ 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,882,177
Number of Sequences: 27780
Number of extensions: 201350
Number of successful extensions: 433
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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