Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2209
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   2.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   4.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   7.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    20   9.5  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   9.5  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 314 YGPLDGKKLPSPMDRQQMPEAESSR 388
           YGP  G K+P      ++ E + S+
Sbjct: 202 YGPEKGPKVPEKKKEDEIDEGKESK 226


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 323 VGRILVCLQGQ*KRKMAPPC 264
           +G ILVC+     RK+  PC
Sbjct: 57  IGNILVCVAVFLVRKLRRPC 76


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 95  KRNEVFYYC 121
           KRNE++Y C
Sbjct: 205 KRNEIYYNC 213


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 323  LDGKKLPSPMDR 358
            LDGK L  P+DR
Sbjct: 968  LDGKPLGFPLDR 979


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 179 YYEGITSRYRIKPEK 223
           Y +G+TS YR++ +K
Sbjct: 116 YCDGLTSVYRMQVDK 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,087
Number of Sequences: 438
Number of extensions: 2423
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)