Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2204
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.78 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.2  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.3  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            22   7.3  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 413 IWCFYLNIICF-NVNGLCEISVDRFC 487
           +W  +  + C  ++  LC ISVDRFC
Sbjct: 116 LWVSFDVLSCTASILNLCMISVDRFC 141


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 688 SWLILPVIICLSQRLSHACLSASPYL 765
           SW+ L +++C +  LS   +S   YL
Sbjct: 113 SWVSLDILLCTASILSLCAISIDRYL 138


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 3   SEVSIHLSYISCPVRSLTYIH 65
           S ++I + YISCP  S+ + H
Sbjct: 180 SILAIKVYYISCPEISVNFAH 200


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 289 NELTERTCRRMSYAYVSRCYGDRS 218
           N L E+T  R  YA+V    G RS
Sbjct: 464 NFLPEKTANRHYYAFVPFSAGPRS 487


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 711 NYWQDQPGALFFVSSKTKTSHRIGRK 634
           NY++++ GA    +S  +  + +GRK
Sbjct: 14  NYYENKDGARIVKASHFELDYMLGRK 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,701
Number of Sequences: 438
Number of extensions: 3942
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)