Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2202
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L40688-1|AAA99338.1|  100|Homo sapiens immunoglobulin kappa chai...    30   7.0  
Z37333-1|CAA85585.1|  116|Homo sapiens immunoglobulin kappa ligh...    30   9.3  
AF026933-1|AAD09382.1|  128|Homo sapiens amyloid kappa light cha...    30   9.3  

>L40688-1|AAA99338.1|  100|Homo sapiens immunoglobulin kappa chain
           protein.
          Length = 100

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -1

Query: 593 FKGYEGGEGLKTYAELQQPEDHGHYYAEHGQALSSDSGEGYKYE 462
           F G   G          +PED   YY +H  +  S  G+G K E
Sbjct: 55  FSGTGSGTDFTLTISRLEPEDFAVYYCQHSDSTQSTFGQGTKLE 98


>Z37333-1|CAA85585.1|  116|Homo sapiens immunoglobulin kappa light
           chain variable region protein.
          Length = 116

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = -1

Query: 593 FKGYEGGEGLKTYAELQQPEDHGHYYAEHGQALSSDSGEGYKYE 462
           F G E G          QPED   YY +   +  S  G+G K E
Sbjct: 62  FSGSESGTDFTLTISSLQPEDFATYYCQQSYSSPSAFGQGTKVE 105


>AF026933-1|AAD09382.1|  128|Homo sapiens amyloid kappa light chain
           variable region protein.
          Length = 128

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -1

Query: 593 FKGYEGGEGLKTYAELQQPEDHGHYYAEHGQALSSDSGEGYKYE 462
           F G   G          QPED G+YY +         G+G K E
Sbjct: 82  FSGSGSGTNFTLTINSLQPEDFGNYYCQQSSTYPRTFGQGTKVE 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,763,068
Number of Sequences: 237096
Number of extensions: 1361313
Number of successful extensions: 3534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3534
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)