BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2202
(704 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2498|AAF53397.1| 218|Drosophila melanogaster CG3474-PA... 34 0.22
AE014298-3204|ABI30997.1| 299|Drosophila melanogaster CG41481-P... 30 3.5
>AE014134-2498|AAF53397.1| 218|Drosophila melanogaster CG3474-PA
protein.
Length = 218
Score = 33.9 bits (74), Expect = 0.22
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = -1
Query: 596 GFKGYEGGEGLKTYAELQQPEDHGHYYAEHGQALSSDSGEGYKYESY 456
G GYEGG Q D+GH + EHG G G SY
Sbjct: 145 GHSGYEGGHVEFEEHSSQSGHDYGHGHEEHGHGHGHGHGHGSSSHSY 191
>AE014298-3204|ABI30997.1| 299|Drosophila melanogaster CG41481-PA
protein.
Length = 299
Score = 29.9 bits (64), Expect = 3.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 39 NITFSLGLNVCLMQNQLIKKTIGFSHTKKNTQT 137
NI F L N C++ ++++KKT+ + H ++ T
Sbjct: 70 NILFILKFNKCMLFHRILKKTLAYGHKIQSQPT 102
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,754,549
Number of Sequences: 53049
Number of extensions: 455172
Number of successful extensions: 1128
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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