Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2201
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060917-1|AAL28465.1|   79|Drosophila melanogaster GM06086p pro...    31   2.0  
AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p pro...    30   2.7  
AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB...    30   2.7  
AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA...    30   2.7  
AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-P...    24   9.9  

>AY060917-1|AAL28465.1|   79|Drosophila melanogaster GM06086p
           protein.
          Length = 79

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 210 LTD*HFACCLCLSSKWMCFDFSSIYFAFI 296
           + D H + C+C++  +  FDF+S YF F+
Sbjct: 1   MCDSHLSKCVCVNQYFFDFDFNSKYFIFL 29


>AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p
           protein.
          Length = 223

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 132 YWIYFLIFFLRVHIIFYFLCFCFSCTYLNNNTS*VFFYCLDGWT 1
           Y  +F +FF    I+ Y  C  FS +++ +    V F   D WT
Sbjct: 39  YVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWT 82


>AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB,
           isoform B protein.
          Length = 215

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 132 YWIYFLIFFLRVHIIFYFLCFCFSCTYLNNNTS*VFFYCLDGWT 1
           Y  +F +FF    I+ Y  C  FS +++ +    V F   D WT
Sbjct: 36  YVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWT 79


>AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA,
           isoform A protein.
          Length = 218

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 132 YWIYFLIFFLRVHIIFYFLCFCFSCTYLNNNTS*VFFYCLDGWT 1
           Y  +F +FF    I+ Y  C  FS +++ +    V F   D WT
Sbjct: 39  YVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWT 82


>AE014134-3259|AAG22448.2|  300|Drosophila melanogaster CG18810-PA
           protein.
          Length = 300

 Score = 23.8 bits (49), Expect(2) = 9.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 87  FYFLCFCFSCTYLNNNTS*VFFYCLDG 7
           FYFL + F    ++  +S +F Y L G
Sbjct: 143 FYFLIYFFLSCMISLTSSSIFIYVLHG 169



 Score = 23.0 bits (47), Expect(2) = 9.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 141 NNRYWIYFLIFF 106
           N RY+ YFLI+F
Sbjct: 138 NYRYFFYFLIYF 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,419,102
Number of Sequences: 53049
Number of extensions: 380259
Number of successful extensions: 682
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)