Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2200
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   4.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 206 PPIAYGVPQGSILGP 250
           P   YG+PQG +L P
Sbjct: 441 PTYDYGIPQGVVLNP 455


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 206 PPIAYGVPQGSILGP 250
           P   YG+PQG +L P
Sbjct: 441 PTYDYGIPQGVVLNP 455


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 259 KYGRAENTALWHSICYRGF 203
           K  R +NTALW  + Y  +
Sbjct: 131 KNARVKNTALWKQLRYEHY 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,016
Number of Sequences: 336
Number of extensions: 3764
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)