Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2200
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 81 9e-16
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 63 2e-10
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 59 3e-09
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 55 5e-08
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical... 31 1.0
Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical pr... 29 3.1
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL032641-1|CAA21645.1| 132|Caenorhabditis elegans Hypothetical ... 29 4.1
AF039045-8|AAB94199.1| 300|Caenorhabditis elegans Hypothetical ... 28 7.1
AF039045-7|AAB94207.1| 333|Caenorhabditis elegans Hypothetical ... 28 7.1
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/148 (33%), Positives = 75/148 (50%)
Frame = +2
Query: 17 LDKKNKVIGIFLDLAKAFDTISILTLITKLEAVGLRGNQLSLFRSYLTGRR*CVKISDLI 196
+D ++ I+LD +KAFD + L+ KL ++ N L +L+ R V+I +
Sbjct: 8 IDHGEQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTL 67
Query: 197 SDEPPIAYGVPQGSILGPTIFLIYINDLCQLNITNGSIYTYADDTALVFHGSSWEAAFSF 376
S GVPQG++L P +F IY+ND+ + + +ADDT L E+ +
Sbjct: 68 SSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTESENNL 127
Query: 377 AQCGLNTVTDWLSKNLLTLNVDKTKYVT 460
Q L+ V DW + LTLN KT +VT
Sbjct: 128 -QSALDAVVDWTKGSKLTLNQSKTVHVT 154
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 62.9 bits (146), Expect = 2e-10
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Frame = +2
Query: 62 KAFDTISILTLITKLEAVGLRGNQLSLFRSYLTGRR*CVKISDLISDE-PPIAYGVPQGS 238
KAFD ++ L+ KL G+ + F +L+ R VK+++ I PI+ GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 239 ILGPTIFLIYINDLCQLNITNGSIYTYADDTALVFHGSSWEAAFSFAQCGLNTVTDWLSK 418
+ GP +FLI+IN L + S +ADD + H Q ++ +T W
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVYSHSP------PLIQTTIDLITTWSEN 115
Query: 419 NLLTLNVDK 445
N L L V K
Sbjct: 116 NKLPLAVHK 124
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 58.8 bits (136), Expect = 3e-09
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = +2
Query: 101 KLEAVGLRGNQLSLFRSYLTGRR*CVKISDLISDEP-PIAYGVPQGSILGPTIFLIYIND 277
KL GL S ++ +L R VKI+ +S PI+ GVPQGS+ GP +F+++IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 278 LCQLNITNGSIYTYADDTALVFHGSSWEAAFSFAQCGLNTVTDWLSKNLLTLNVDKTKYV 457
L +I +ADD +FH + Q ++ + W N L L TK
Sbjct: 899 LLIDLAPTINISCFADDVK-IFHTDP-----TIIQNSIDIIVSWSKLNELPL--APTKSA 950
Query: 458 TFSLSTRGKISS 493
+L TR K S
Sbjct: 951 LLALGTRNKNQS 962
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 54.8 bits (126), Expect = 5e-08
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Frame = +2
Query: 2 EIVTKLDKKN---KVIGIFLDLAKAFDTISILTLITKL-EAVGLRGNQLSLFRSYLTGRR 169
+I+ L+ KN + I LDL AFD + L L EA G+ +YL R
Sbjct: 455 DIIGGLNMKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRL 514
Query: 170 *CVKISDLISDEPPIAYGVPQGSILGPTIFLIYINDLCQLNITNGSIYTYADDTALVFHG 349
+ S + GVPQGS++ P +F Y+ D+ T + +YADD +++
Sbjct: 515 IRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDT--MLISYADDMSIIARD 572
Query: 350 SSWEAAFSFAQCGLNTVTDWLSKNLLTLNVDKTKYVTFS 466
E A Q ++ + +L + ++++ +K+ FS
Sbjct: 573 KKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVFS 611
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Frame = +2
Query: 44 IFLDLAKAFDTISILTLITKLEAVGLRGNQLSLFRSYLTGRR*CVKISD-LISDEPPIAY 220
I L+ AFD + LI+KL + + FR ++ + V+++D L S++
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 221 GVPQGSILGPTIFLIYIND-LCQLNIT-NGSIYTYADDTALVFHGSSWEAAFSFAQCGLN 394
G P+GS +FL++IN LC++ I + S ++D + H + L
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIYSHEP------IMIEKSLR 1003
Query: 395 TVTDWLSKNLLTL---NVDKTKYVTF 463
+ DW + N LT+ ++ ++ Y+ F
Sbjct: 1004 KIEDWSTSNKLTIDSNDIVRSVYIVF 1029
>AF016421-10|AAC25792.1| 473|Caenorhabditis elegans Hypothetical
protein F44E7.7 protein.
Length = 473
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 347 GSSWEAAFSFAQCGLNTVTDWLSKNLLTLNVDKTKYVTFSL 469
G+ W AA F C + + LT+ +KTK+VT +L
Sbjct: 314 GTGWAAALPFVSCAIVKFASGQLTDRLTMFSEKTKFVTCTL 354
>Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical
protein F20D1.8 protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 383 CGLNTVTDWLSKNLLTLNVDKTKYVTFSLSTRGKISSSPFSLIAHSCN 526
C +T+ ++ + V + Y +S G+ +SPF + HSCN
Sbjct: 190 CKYRVLTESKTEEVAFATVGQIVYHEWSCEAPGQNQTSPFCVTVHSCN 237
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +2
Query: 44 IFLDLAKAFDTISILTLITKLEAVGLRGNQLSLFRS-YLTGRR*CVKISDLISDEPPIAY 220
+F+D KAFDT+ + L+ G G + L + Y ++ P+
Sbjct: 518 VFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNFTPFHRPVA--VPVTK 575
Query: 221 GVPQGSILGPTIF 259
GV QG + P +F
Sbjct: 576 GVRQGDPISPNLF 588
>AL032641-1|CAA21645.1| 132|Caenorhabditis elegans Hypothetical
protein Y5F2A.1 protein.
Length = 132
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 494 SPFSLIAHSCNALGTNCLRL 553
+P+ LI HSCN NC+R+
Sbjct: 80 APYLLITHSCNPSKPNCVRI 99
>AF039045-8|AAB94199.1| 300|Caenorhabditis elegans Hypothetical
protein F15E11.2 protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 413 SKNLLTLNVDKTKYVTFSLSTRGKIS 490
S +L LNV K +++SL T GKIS
Sbjct: 161 SGSLTNLNVPNLKNISYSLPTEGKIS 186
>AF039045-7|AAB94207.1| 333|Caenorhabditis elegans Hypothetical
protein F15E11.11 protein.
Length = 333
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 413 SKNLLTLNVDKTKYVTFSLSTRGKIS 490
S +L LNV K +++SL T GKIS
Sbjct: 194 SGSLTNLNVPNLKNISYSLPTEGKIS 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,681,386
Number of Sequences: 27780
Number of extensions: 333831
Number of successful extensions: 774
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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