Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2199
(697 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 3e-59
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 224 6e-59
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 224 6e-59
SB_56| Best HMM Match : Actin (HMM E-Value=0) 224 6e-59
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 223 8e-59
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 222 2e-58
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 194 6e-50
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 74 1e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 5e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_54| Best HMM Match : Actin (HMM E-Value=0) 46 2e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.006
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.1
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 29 2.7
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 29 3.6
SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1) 28 6.3
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 225 bits (550), Expect = 3e-59
Identities = 108/137 (78%), Positives = 114/137 (83%)
Frame = -1
Query: 697 SYELSRRSGHHYRKRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV 518
SYEL + P L LG E+ GIHETTYNSIMKCDVDIRKDLYANTV
Sbjct: 213 SYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTV 272
Query: 517 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 338
+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 273 MSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 332
Query: 337 KQEYDESGPSIVHRKCF 287
KQEYDESGP+IVHRKCF
Sbjct: 333 KQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 224 bits (547), Expect = 6e-59
Identities = 108/137 (78%), Positives = 112/137 (81%)
Frame = -1
Query: 697 SYELSRRSGHHYRKRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV 518
SYEL + P LG E+ GIHETTYNSIMKCDVDIRKDLYANTV
Sbjct: 202 SYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 261
Query: 517 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 338
LSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 262 LSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 321
Query: 337 KQEYDESGPSIVHRKCF 287
KQEYDESGP+IVHRKCF
Sbjct: 322 KQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 224 bits (547), Expect = 6e-59
Identities = 108/137 (78%), Positives = 112/137 (81%)
Frame = -1
Query: 697 SYELSRRSGHHYRKRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV 518
SYEL + P LG E+ GIHETTYNSIMKCDVDIRKDLYANTV
Sbjct: 240 SYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 299
Query: 517 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 338
LSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 337 KQEYDESGPSIVHRKCF 287
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 224 bits (547), Expect = 6e-59
Identities = 108/137 (78%), Positives = 112/137 (81%)
Frame = -1
Query: 697 SYELSRRSGHHYRKRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV 518
SYEL + P LG E+ GIHETTYNSIMKCDVDIRKDLYANTV
Sbjct: 239 SYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 298
Query: 517 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 338
LSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 299 LSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
Query: 337 KQEYDESGPSIVHRKCF 287
KQEYDESGPSIVHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 223 bits (546), Expect = 8e-59
Identities = 108/137 (78%), Positives = 112/137 (81%)
Frame = -1
Query: 697 SYELSRRSGHHYRKRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV 518
SYEL + P LG E+ GIHETTYNSIMKCDVDIRKDLYANTV
Sbjct: 240 SYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 299
Query: 517 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 338
LSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 300 LSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 359
Query: 337 KQEYDESGPSIVHRKCF 287
KQEYDESGPSIVHRKCF
Sbjct: 360 KQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 222 bits (542), Expect = 2e-58
Identities = 107/137 (78%), Positives = 112/137 (81%)
Frame = -1
Query: 697 SYELSRRSGHHYRKRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV 518
SYEL + P LG E+ GIHETTYNSIMKCDVDIRKDLYANTV
Sbjct: 239 SYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTV 298
Query: 517 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 338
LSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 299 LSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
Query: 337 KQEYDESGPSIVHRKCF 287
KQEYDESGPSIVHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 194 bits (473), Expect = 6e-50
Identities = 92/137 (67%), Positives = 103/137 (75%)
Frame = -1
Query: 697 SYELSRRSGHHYRKRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV 518
+YEL + P LG EA GIHE YN IMKCDVDIRKDLY+N V
Sbjct: 13 TYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCV 72
Query: 517 LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 338
LSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 73 LSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIA 132
Query: 337 KQEYDESGPSIVHRKCF 287
K+EY E GP IVHRKCF
Sbjct: 133 KEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 74.1 bits (174), Expect = 1e-13
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 16/122 (13%)
Frame = -1
Query: 592 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA-------------- 455
+ E N I C +D+R+ LY N VLSGG+TM+ R+Q++I
Sbjct: 223 LSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSG 282
Query: 454 --LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 281
+ P ++ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F
Sbjct: 283 GRIKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-L 341
Query: 280 HR 275
HR
Sbjct: 342 HR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -1
Query: 610 GYEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 431
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 430 KII---APPERKYSVWIGGSILASL 365
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 61.7 bits (143), Expect = 6e-10
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 29/130 (22%)
Frame = -1
Query: 616 VLGYEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL----- 452
++ E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 270 LINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERV 329
Query: 451 ----------------APST-----MKIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMW 344
P T K KI I P RK+ V++GG++LA + W
Sbjct: 330 LKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFW 389
Query: 343 ISKQEYDESG 314
++++EY+E G
Sbjct: 390 MTRKEYEEKG 399
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 684 PDGQVITIGNERFRCPEALFQPSFLGMK 601
PDG+V+ + ERF PEALFQP + ++
Sbjct: 247 PDGRVVKLSGERFEAPEALFQPHLINVE 274
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -1
Query: 574 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 419
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 418 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 320
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = -1
Query: 616 VLGYEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 509
+LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2311 LLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2
Query: 684 PDGQVITIGNERFRCPEALFQPSFLG 607
PDGQ I IG+ERFR E LFQPS LG
Sbjct: 2288 PDGQSIRIGSERFRAAEPLFQPSLLG 2313
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 571 SIMKCDVDIRKDLYANTVLSGGTTMYPG 488
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = -1
Query: 658 KRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV-----LSGGTTMY 494
KR+I L +G+ P V + + TY + +K + + K Y NTV LS GT Y
Sbjct: 647 KRQISLSKGTYPNTVK--RQISLSKGTYQNTVKRQISLSKGTYPNTVKRQISLSKGT--Y 702
Query: 493 PGIADRMQKEITALAPSTMKIKI 425
P R P+T+K +I
Sbjct: 703 PNTVKRQISLSKGTYPNTVKRQI 725
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Frame = -1
Query: 658 KRKIPLPRGSLPTLVLGYEACGIHETTYNSIMKCDVDIRKDLYANTV-----LSGGTTMY 494
KR+I L +G+ P V + E TY + +K + + + Y NTV LS GT Y
Sbjct: 587 KRQINLSKGTYPNTVK--RQISLLEGTYQNTVKRQISLLEGTYPNTVKRQISLSKGT--Y 642
Query: 493 PGIADRMQKEITALAPSTMKIKI 425
P R P+T+K +I
Sbjct: 643 PNTVKRQISLSKGTYPNTVKRQI 665
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 378 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 551
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 552 TS 557
S
Sbjct: 815 AS 816
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 360 PSNRCGSRNRSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 241
P N+ G++ R +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 684 PDGQVITIGNERFRCPEALFQPSFL 610
PDGQ+I+IG E E LF+P L
Sbjct: 874 PDGQMISIGYECISSMEPLFRPDLL 898
>SB_48528| Best HMM Match : Extensin_2 (HMM E-Value=1)
Length = 329
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 688 LSRRSGHHYRKRKIPLPRGSLP 623
L++R HY++ +PLPRG P
Sbjct: 139 LTKRRESHYQEEGVPLPRGGSP 160
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 688 LSRRSGHHYRKRKIPLPRGSLP 623
L++R HY++ +PLPRG P
Sbjct: 264 LTKRRESHYQQEGVPLPRGGSP 285
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 526 NTVLSGGTTMYPGIADRMQKEITALAP 446
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -2
Query: 393 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRC 265
GS+ SP S P +R GSR R+ T+S A + +T ++C
Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKC 384
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,534,094
Number of Sequences: 59808
Number of extensions: 476756
Number of successful extensions: 1990
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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