Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2196
(351 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid anti... 30 1.8
AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein. 29 3.1
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 29 3.1
AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein. 29 3.1
AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein. 29 3.1
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 29 3.1
AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein. 29 3.1
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 29 3.1
AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein. 29 3.1
AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein. 29 3.1
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 29 3.1
AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein. 29 3.1
AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein. 29 3.1
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 29 3.1
AK096713-1|BAC04848.1| 990|Homo sapiens protein ( Homo sapiens ... 29 3.1
AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens ... 29 3.1
AB018271-1|BAA34448.2| 1637|Homo sapiens KIAA0728 protein protein. 29 3.1
>AF400226-1|AAL62061.1| 5171|Homo sapiens bullous pemphigoid antigen 1
eA protein.
Length = 5171
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3562 RQQQEEHR-QLRESIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3603
>AL590005-3|CAI14988.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3888 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3929
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 5974 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 6015
>AL512448-3|CAI16610.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3562 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3603
>AL512448-2|CAI16608.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3888 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3929
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 5974 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 6015
>AL512422-3|CAI14342.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3888 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3929
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 5974 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 6015
>AL137008-4|CAI20332.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3562 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3603
>AL137008-3|CAI20331.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3888 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3929
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 5974 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 6015
>AL096710-4|CAI22045.1| 5144|Homo sapiens dystonin protein.
Length = 5144
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3562 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3603
>AL096710-3|CAI22043.1| 5457|Homo sapiens dystonin protein.
Length = 5457
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 3888 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 3929
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 5974 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 6015
>AK096713-1|BAC04848.1| 990|Homo sapiens protein ( Homo sapiens
cDNA FLJ39394 fis, clone PLACE6007925, moderately
similar to Homo sapiens mRNA for actin binding protein
ABP620. ).
Length = 990
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 396 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 437
>AK055189-1|BAB70870.1| 1174|Homo sapiens protein ( Homo sapiens cDNA
FLJ30627 fis, clone CTONG2001955, moderately similar to
Homo sapiens mRNA for actin binding protein ABP620. ).
Length = 1174
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 1121 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 1162
>AB018271-1|BAA34448.2| 1637|Homo sapiens KIAA0728 protein protein.
Length = 1637
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 203 RNRSLRHRSQFSAPFSNHRPHS*AIKKKKKNGPRPLEGGPGTQFAL 340
R + HR Q + H+PH I K K GP+ LE PG F++
Sbjct: 28 RQQQEEHR-QLRELIAEHKPH---IDKMNKTGPQLLELSPGEGFSI 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,843,654
Number of Sequences: 237096
Number of extensions: 905302
Number of successful extensions: 1793
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1793
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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