Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2194
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IDE5 Cluster: Putative uncharacterized protein MAL13P...    36   1.4  
UniRef50_A4VEY6 Cluster: Putative uncharacterized protein; n=1; ...    36   1.4  
UniRef50_Q4UAY7 Cluster: Putative uncharacterized protein; n=2; ...    35   1.8  
UniRef50_Q10XQ0 Cluster: GUN4-like; n=1; Trichodesmium erythraeu...    35   2.4  
UniRef50_P37535 Cluster: Uncharacterized protein yaaN; n=7; Baci...    33   5.6  
UniRef50_A5UP22 Cluster: Predicted type II restriction enzyme, m...    33   7.4  

>UniRef50_Q8IDE5 Cluster: Putative uncharacterized protein
           MAL13P1.275; n=4; Plasmodium|Rep: Putative
           uncharacterized protein MAL13P1.275 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1288

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +1

Query: 463 DILNNLALESSEHQKNHILVSENQ-LIDEMKSNKELWTNMKMHFETN 600
           DILNN+  E +E   ++  +S NQ L++++ +N+ ++ NM++   TN
Sbjct: 209 DILNNMYYEENEKSDDYSSLSNNQNLVNKVANNRNVYENMRLINNTN 255


>UniRef50_A4VEY6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 351

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = -3

Query: 528 LRNQYMILLMFRAFQCK-VVQDI*LKWNK--LVMLSLSKI*FRDLDYFVETY 382
           L+N YMI LMF  +Q + V++ + +KW K  +  L LS I FR+L +F   Y
Sbjct: 296 LKNFYMINLMFIHYQIQNVMEQMNMKWKKGLINYLKLSLIYFRNLSFFEFNY 347


>UniRef50_Q4UAY7 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 618

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 17/56 (30%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
 Frame = +1

Query: 478 LALESSEHQK--NHILVSENQLIDEMKSNKELWTNMKMHFETNRLPWYHMKTVILD 639
           + +ES ++ K  N++++S N   + +K+ + L  N+K+ ++ N LP+Y  K +I+D
Sbjct: 188 IIIESPDYMKLYNNLIISRNTF-NILKNYQILENNIKIDYKNNFLPFYKYKKIIID 242


>UniRef50_Q10XQ0 Cluster: GUN4-like; n=1; Trichodesmium erythraeum
           IMS101|Rep: GUN4-like - Trichodesmium erythraeum (strain
           IMS101)
          Length = 305

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +1

Query: 469 LNNLALESSEHQKNHILVSENQLIDEMKSNKELWTNMKMHFETNRLPW--YHMKTVILDK 642
           L N+A +    ++N++ + +   +D++++     T  ++   + +L W  YH++ +  + 
Sbjct: 71  LPNVAADKINDKQNYLAIQKQ--LDQIQAQLHQATIERLQLHS-QLEWVLYHLEQLNSET 127

Query: 643 L-KTLYAADDKSENVSAKGPEWSQMGLDY 726
           L +TLY  D+K  ++    P  S++G++Y
Sbjct: 128 LAQTLYRIDEKLHSIPTPEPPMSEVGINY 156


>UniRef50_P37535 Cluster: Uncharacterized protein yaaN; n=7;
           Bacilli|Rep: Uncharacterized protein yaaN - Bacillus
           subtilis
          Length = 386

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 496 EHQKNHILVSENQLIDEM-KSNKELWTNMKMHFETNRLPWYHMKTVILDKLKTLYAADDK 672
           EH KN  L+S+N+L++++ + NKE +  + ++     L    +KT  + +LK    + D 
Sbjct: 156 EHSKNA-LISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELKTKTIPELKQQAESSDH 214

Query: 673 SE 678
           ++
Sbjct: 215 NQ 216


>UniRef50_A5UP22 Cluster: Predicted type II restriction enzyme,
           methylase subunit; n=1; Methanobrevibacter smithii ATCC
           35061|Rep: Predicted type II restriction enzyme,
           methylase subunit - Methanobrevibacter smithii (strain
           PS / ATCC 35061 / DSM 861)
          Length = 646

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 21/73 (28%), Positives = 39/73 (53%)
 Frame = +1

Query: 454 F*LDILNNLALESSEHQKNHILVSENQLIDEMKSNKELWTNMKMHFETNRLPWYHMKTVI 633
           F + ILN + +   E+ + + LVS+N  I     +KE W N +  F+  + P+ +  + +
Sbjct: 286 FEVGILNRMPILIKENSEINKLVSDNITI-----SKENWDNYEFSFDFIKHPFMNFNSDL 340

Query: 634 LDKLKTLYAADDK 672
           L +   +YA+D K
Sbjct: 341 LKECYEMYASDFK 353


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,345,032
Number of Sequences: 1657284
Number of extensions: 9301912
Number of successful extensions: 22594
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22568
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)