Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2194
         (740 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.98 
SB_15570| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_56062| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_24762| Best HMM Match : Astacin (HMM E-Value=0)                     28   9.1  
SB_15638| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_47695| Best HMM Match : DUF1106 (HMM E-Value=8.5)                   28   9.1  
SB_32642| Best HMM Match : IL10 (HMM E-Value=2.5)                      28   9.1  
SB_15149| Best HMM Match : HALZ (HMM E-Value=7.6)                      28   9.1  

>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1141

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +1

Query: 466 ILNNLALESSEHQKNHILVSENQLIDEMKSNKELWTNMKMHFETNR 603
           +++ L     +H KN I+   N   + + S+K+LW ++K  F   +
Sbjct: 164 VVSGLTFHLRDHAKNDIIDVVNSASERLSSSKKLWRSLKNLFSVGK 209


>SB_15570| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 484

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 421 LTQTKHN*LVPF*LDILNNLALESSEHQKNHIL 519
           L  TKH   +PF +D L+++A+E+ + Q +H+L
Sbjct: 317 LVVTKHPKFMPFVVDFLDSVAIETPDSQ-SHVL 348


>SB_56062| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 728

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 739 SKVKYNPIPSGTIRVP*QIHFHFYHLPHKVSSACPVLQFS 620
           SK+    +  G  RV   +H   YH+P  + S  P++QFS
Sbjct: 686 SKLGAKRVGYGNARVTPYMHAVPYHIPQFILSHGPIIQFS 725


>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
          Length = 733

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/77 (20%), Positives = 40/77 (51%)
 Frame = +1

Query: 487 ESSEHQKNHILVSENQLIDEMKSNKELWTNMKMHFETNRLPWYHMKTVILDKLKTLYAAD 666
           +S   + N++ +  N +    ++N + +T+ K+  +   LP+     +  D+   L++ D
Sbjct: 585 QSRPDRDNYVQILWNNIKPGKENNFKTYTHGKL--DMLNLPYDTSSIMHYDRF--LFSKD 640

Query: 667 DKSENVSAKGPEWSQMG 717
            +S  + A+G  W+++G
Sbjct: 641 GRSPTIIARGRPWTKLG 657


>SB_15638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 404

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 739 SKVKYNPIPSGTIRVP*QIHFHFYHLPHKVSSACPVLQFS 620
           SK+    +  G  RV   +H   YH+P  + S  P++QFS
Sbjct: 318 SKLGAKRVGYGNARVTPYMHAVPYHIPQFILSHGPIIQFS 357


>SB_47695| Best HMM Match : DUF1106 (HMM E-Value=8.5)
          Length = 248

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 739 SKVKYNPIPSGTIRVP*QIHFHFYHLPHKVSSACPVLQFS 620
           SK+    +  G  RV   +H   YH+P  + S  P++QFS
Sbjct: 125 SKLGAKRVGYGNARVTPYMHAVPYHIPQFILSHGPIIQFS 164


>SB_32642| Best HMM Match : IL10 (HMM E-Value=2.5)
          Length = 544

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 739 SKVKYNPIPSGTIRVP*QIHFHFYHLPHKVSSACPVLQFS 620
           SK+    +  G  RV   +H   YH+P  + S  P++QFS
Sbjct: 421 SKLGAKRVGYGNARVTPYMHAVPYHIPQFILSHGPIIQFS 460


>SB_15149| Best HMM Match : HALZ (HMM E-Value=7.6)
          Length = 328

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 739 SKVKYNPIPSGTIRVP*QIHFHFYHLPHKVSSACPVLQFS 620
           SK+    +  G  RV   +H   YH+P  + S  P++QFS
Sbjct: 286 SKLGAKRVGYGNARVTPYMHAVPYHIPQFILSHGPIIQFS 325


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,685,880
Number of Sequences: 59808
Number of extensions: 287585
Number of successful extensions: 658
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)