Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2194
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10070-1|AAC13765.1|  887|Drosophila melanogaster villin-like pr...    29   8.8  
AY121684-1|AAM52011.1|  887|Drosophila melanogaster RE36860p pro...    29   8.8  
AE014134-2860|AAN10991.1|  888|Drosophila melanogaster CG6433-PB...    29   8.8  
AE014134-2859|AAF53623.1|  887|Drosophila melanogaster CG6433-PA...    29   8.8  

>U10070-1|AAC13765.1|  887|Drosophila melanogaster villin-like
           protein protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 517 LVSENQLIDEMKSNKELWTNMKMHF 591
           L+ EN L+ E K +KE W ++ M+F
Sbjct: 603 LMGENSLVLEGKESKEFWQSVAMYF 627


>AY121684-1|AAM52011.1|  887|Drosophila melanogaster RE36860p
           protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 517 LVSENQLIDEMKSNKELWTNMKMHF 591
           L+ EN L+ E K +KE W ++ M+F
Sbjct: 603 LMGENSLVLEGKESKEFWQSVAMYF 627


>AE014134-2860|AAN10991.1|  888|Drosophila melanogaster CG6433-PB,
           isoform B protein.
          Length = 888

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 517 LVSENQLIDEMKSNKELWTNMKMHF 591
           L+ EN L+ E K +KE W ++ M+F
Sbjct: 604 LMGENSLVLEGKESKEFWQSVAMYF 628


>AE014134-2859|AAF53623.1|  887|Drosophila melanogaster CG6433-PA,
           isoform A protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 517 LVSENQLIDEMKSNKELWTNMKMHF 591
           L+ EN L+ E K +KE W ++ M+F
Sbjct: 603 LMGENSLVLEGKESKEFWQSVAMYF 627


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,121,932
Number of Sequences: 53049
Number of extensions: 418355
Number of successful extensions: 1013
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)