Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2189
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    24   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.9  

>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 166 SGQFSEDMIPTVGFNMRKVT 225
           S +  EDM+ T G+ +RK T
Sbjct: 66  SRELGEDMVTTTGYKLRKGT 85


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 287  HIERNLGWPPISHTLIVTFP 228
            H+E + G   ++H LIV  P
Sbjct: 1377 HVENDYGQDSVTHQLIVNAP 1396


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 336  RVDHVHNSIDPS 301
            R+DH+  +IDPS
Sbjct: 1147 RLDHIEKTIDPS 1158


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 336  RVDHVHNSIDPS 301
            R+DH+  +IDPS
Sbjct: 1147 RLDHIEKTIDPS 1158


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 336  RVDHVHNSIDPS 301
            R+DH+  +IDPS
Sbjct: 1147 RLDHIEKTIDPS 1158


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 336  RVDHVHNSIDPS 301
            R+DH+  +IDPS
Sbjct: 1147 RLDHIEKTIDPS 1158


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 611 PS*CALPDLLCAISHWRVMSML 546
           P+ C LPD  C+    R+   L
Sbjct: 157 PTQCVLPDCFCSADGTRIPGQL 178


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 611 PS*CALPDLLCAISHWRVMSML 546
           P+ C LPD  C+    R+   L
Sbjct: 164 PTQCVLPDCFCSADGTRIPGQL 185


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 52  LINRILDWIKSLFWKEEMELTLVGLQYSGKTTFVNVIAS 168
           LI   L WI +LF  E +   +    ++ K TFV  +A+
Sbjct: 443 LIALKLVWIVALFKNENLSEMVKQFLFTQKFTFVAGLAT 481


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,987
Number of Sequences: 336
Number of extensions: 3242
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)