Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2189
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            57   7e-10
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    35   0.003
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      30   0.066
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    30   0.087
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   3.3  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   7.6  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 56.8 bits (131), Expect = 7e-10
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
 Frame = +1

Query: 100 EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGNVTIK--VWDIGGQ 267
           + +L L+G    GK++ V     GQF E    T+G  F  + +   + T+K  +WD  GQ
Sbjct: 24  QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83

Query: 268 PRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLGNKRDL 444
            R+ S+   Y RG  A + + D  + D    ++  +   L++Q    I + + GNK DL
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKE-LQRQASPNIVIALAGNKADL 141


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
 Frame = +1

Query: 103 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTV--GFNMRKVTKG-NVTIKVWDIGGQPR 273
           ++  +VG    GKT  +    +  F  + +PT    ++   V  G  V++ +WD  GQ  
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQED 66

Query: 274 FRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLGNKRDLPQA 453
           +  +        +  +     A P   E   ++ +  + K      P++++G K DL + 
Sbjct: 67  YDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI-KHHCPDAPIILVGTKIDLRED 125

Query: 454 LDEHGLIERMNLSAIQ 501
            +   L+    LSA++
Sbjct: 126 RETISLLADQGLSALK 141


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 0.066
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +1

Query: 190 IPTVGFNMRKVTKGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKI 354
           +PT G          +  ++ D+GGQ   R  W      V +I+++V  ++ D+I
Sbjct: 178 VPTTGIIEYPFDLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 232



 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +1

Query: 94  KEEMELTLVGLQYSGKTTFVN----VIASGQFSED 186
           + E++L L+G   SGK+TF+     +  SG   ED
Sbjct: 31  RRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDED 65


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 29.9 bits (64), Expect = 0.087
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 193 PTVGFNMRKVTKGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKI 354
           PT G         ++  ++ D+GGQ   R  W      V +I+++V  ++ D+I
Sbjct: 36  PTTGILEYPFDLDSIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 89


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 343 PDKIEASRNELHSL-LEKQQLTGIPVLVLGNKRDLPQALDEHGLIERMNLSAIQ 501
           P+ +   +  L  L L+  QLTG+P  +L N  +L      H  I  ++  A+Q
Sbjct: 368 PEDLLRDQKALQVLQLQHNQLTGLPAGLLRNTVELHTLRLSHNQIGELSAVALQ 421


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +3

Query: 96  GGNGAYTGGLAVFGQNNFC*RHCFRPV**RHDSNSRFQHAQSNQRKRNNQGMGYWWPTKI 275
           G  G YT    V G N FC +        R     +  +A      RNNQ +GY     +
Sbjct: 301 GTVGRYTREPGVMGYNEFCEKLATEAWDLRWSEEQQVPYA-----VRNNQWVGYDDLRSV 355

Query: 276 PFNVGALLQRG 308
              V  LL +G
Sbjct: 356 QLKVKYLLDQG 366


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,050
Number of Sequences: 2352
Number of extensions: 13556
Number of successful extensions: 108
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)