Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2186
         (743 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    36   0.80 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    35   2.4  
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    34   4.2  
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   5.6  
UniRef50_Q98BT1 Cluster: ABC transporter, permease protein; n=1;...    33   9.8  

>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 36.3 bits (80), Expect = 0.80
 Identities = 26/90 (28%), Positives = 40/90 (44%)
 Frame = -2

Query: 577 FIAHQNTFQIVVVA*EIRRPSGAFVLSDAPVFEFQAGTNFSNELRTQQMFTIDFHGEGIT 398
           F   +N   I+ V  E     GAF + +        G + + E R + +  +   G    
Sbjct: 258 FEGEKNVGSILTVP-ESSNKMGAFGVEEGMEMLLSGGVSINEEARGEALKPLAKRGRPKG 316

Query: 397 SFNKIETRKIILCVITGGRTSCESPRVGTT 308
           S NKI+ +++ L  +T G T C S  VGTT
Sbjct: 317 SKNKIKKKEVDL--VTNGETVCGSANVGTT 344


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +2

Query: 134 DDLTAHLVLSGFWSP 178
           D+LTAHLVLSG+WSP
Sbjct: 161 DELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 310 WYLPAGTHKRSYHQ 351
           WYLPA THKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 263 SNRNALLLHGRNRQGGGTYPRGLTRGPTTSDYAKYNF 373
           + RNALL+HG N  G  TY RGL    +   Y  + F
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGLAGHLSREGYRVFCF 148


>UniRef50_Q98BT1 Cluster: ABC transporter, permease protein; n=1;
           Mesorhizobium loti|Rep: ABC transporter, permease
           protein - Rhizobium loti (Mesorhizobium loti)
          Length = 289

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +3

Query: 375 RVSILLNDVIPSPWKSIVNIC*VRNSLEKLVPA*NSNTGASLNTNAPD-GRLIS*ATTTI 551
           R+ I+L +V+P+   SIV +  +   +  +V A  S    S++T+ P  G +I+    +I
Sbjct: 193 RIGIMLREVLPNVVPSIVALLSLEMGIAVIVEAILSFVNLSISTDDPTWGGIIAEGRLSI 252

Query: 552 *NVFWCAIKYILTLSLSL 605
              +W  +  ++TL L++
Sbjct: 253 HQAWWVLVFPLITLILTV 270


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,748,195
Number of Sequences: 1657284
Number of extensions: 15846245
Number of successful extensions: 32553
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32548
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)