Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2186
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    24   1.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.0  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 634 ISPNSKKQDIDNRIRSDHIRNNV*QQHKWHSHSI 735
           ++  +KKQ++  ++  D + N+   QHKW   SI
Sbjct: 103 LTAEAKKQNL--KVILDLVPNHTSDQHKWFQMSI 134


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 444 RNSLEKLVPA*NSNTGASLNTN 509
           RNS    + A N+NT AS N N
Sbjct: 221 RNSNNSTITAGNANTNASNNNN 242


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +1

Query: 304 GRWYLPAG 327
           G+WYLP+G
Sbjct: 238 GKWYLPSG 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,743
Number of Sequences: 438
Number of extensions: 4634
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)