Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2182
(730 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 44 2e-05
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 40 4e-04
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 34 0.024
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 33 0.055
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 31 0.17
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 31 0.17
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 30 0.29
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 30 0.29
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 30 0.39
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 30 0.39
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 30 0.39
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 0.51
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 29 0.51
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 29 0.51
SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subu... 29 0.68
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 29 0.68
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 29 0.90
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 29 0.90
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.90
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 28 1.2
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 28 1.2
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 28 1.6
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 28 1.6
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 28 1.6
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 28 1.6
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 28 1.6
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 28 1.6
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 27 2.1
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 2.7
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 27 2.7
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 27 2.7
SPAPB17E12.10c |||SAM-dependent methyltransferase|Schizosaccharo... 27 2.7
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 27 3.6
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 27 3.6
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 27 3.6
SPAC20G8.01 |cdc17||ATP-dependent DNA ligase Cdc17|Schizosacchar... 26 4.8
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 26 4.8
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 26 4.8
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 6.3
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 26 6.3
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 26 6.3
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 26 6.3
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 6.3
SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit Sen2|Sc... 26 6.3
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 25 8.4
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 25 8.4
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 25 8.4
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 25 8.4
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.4
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 8.4
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 44.4 bits (100), Expect = 2e-05
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Frame = +3
Query: 297 PNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEH 476
P S S + S + + +S ++ ++ S +SES + + +E+S ++S+ +
Sbjct: 64 PEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESE 123
Query: 477 VNLNVDKSEQLEIVEPCSSPVK-----DPVIKQDEGKEFKNQREVDDIKEQSQDSASKIG 641
+ V E+ E SS + + V+K +E KE + + +S+ +S
Sbjct: 124 EEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSE 183
Query: 642 GAEETEVVSE-DELPEVQKPSIKDAENVS 725
EE EVV + +E E S D+E+ S
Sbjct: 184 SEEEEEVVEKTEEKKEGSSESSSDSESSS 212
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 39.9 bits (89), Expect = 4e-04
Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Frame = +3
Query: 123 TEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAGDYLENNGPRFSTDSFDIGDNAVTFPN 302
+E E +S D SS+ ++ ++ + + S+ E+ S++ D ++ + +
Sbjct: 117 SESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES---SSEGSDSSSSSSSSES 173
Query: 303 DSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHVN 482
+S +S + +S SDS S + D+DS S S ++S+ + +S + S+ +
Sbjct: 174 ES-SSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSE 232
Query: 483 LNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDI--KEQSQDSASKIGGAEET 656
N S + SS D + + + ++ D S+D +S E+
Sbjct: 233 DNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSES 292
Query: 657 EVVSED 674
E SED
Sbjct: 293 ESSSED 298
Score = 39.1 bits (87), Expect = 6e-04
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Frame = +3
Query: 51 SENPMDTDEGPLINENSNGLSHLLTEGEFNSVDAAVDESSTSNQCFLNAVEL-SAGSAGD 227
S + D++ + + S +E E +S D SS+ ++ ++ + S+ S+ D
Sbjct: 201 SSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSD 260
Query: 228 YLENNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQH 407
+ + S S + D+ +DS +S +E +S SDS S + D+ S +
Sbjct: 261 SESESSSKDSDSSSNSSDSEDDSSSDSSDSE-SESSSEDSDSTSSSSDSDSSSSSEDGNS 319
Query: 408 ATDSNV-GEINENSGNDSNFATEHVNLNVDKSEQL 509
TD+ GE++ S +S + E ++ + S ++
Sbjct: 320 NTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKI 354
Score = 35.1 bits (77), Expect = 0.010
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Frame = +3
Query: 300 NDSLNSALTEDN---SIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFAT 470
+ S + + +EDN S SDS S + D+DS S S ++S+ E +++S + S+ +
Sbjct: 115 SSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESS-SEGSDSSSSSSSSES 173
Query: 471 EHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAE 650
E + + D S E SS E ++ E D S S S+ +E
Sbjct: 174 ESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESE-SSSE 232
Query: 651 ETEVVSEDELPEVQKPSIKDAENVS 725
+ + S E + S +D+++ S
Sbjct: 233 DNDSSSSSSDSESESSS-EDSDSSS 256
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 33.9 bits (74), Expect = 0.024
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +3
Query: 96 NSNGLSHLLTEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAGDYLENNGPRFSTDSFDI 275
NSN H ++ + ++ A + FL +E S ++ N P DS +
Sbjct: 77 NSNNEKHENSDKKIHTTVLASGHEDSDYSTFLPVIETSKVKDANHFPPNYPEPKNDS--V 134
Query: 276 GDNAVTFPNDSLNSA 320
N FPNDS++SA
Sbjct: 135 SSNIDEFPNDSISSA 149
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 32.7 bits (71), Expect = 0.055
Identities = 31/152 (20%), Positives = 57/152 (37%)
Frame = +3
Query: 225 DYLENNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQ 404
D E + +S N ND +A N QS D+ ++ +
Sbjct: 19 DAAEQDAASVKINSTRASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGE 78
Query: 405 HATDSNVGEINENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKN 584
D N E++ + ND ++V N ++++ E E ++ +DE +
Sbjct: 79 ---DGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGGRR 135
Query: 585 QREVDDIKEQSQDSASKIGGAEETEVVSEDEL 680
+R D + Q D +++ EE EDE+
Sbjct: 136 KRARHDRRNQFLDIEAEVDEDEEELEDEEDEI 167
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 31.1 bits (67), Expect = 0.17
Identities = 21/108 (19%), Positives = 53/108 (49%)
Frame = +3
Query: 381 DSRQSESQHATDSNVGEINENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQ 560
+SR +S+ + D + +N + N+S ++ +K Q + +PV+K+
Sbjct: 278 NSRDEDSELSIDVPLSMLNRSLANNSQ---KNKKRTPNKPLQESSINSVKEGESNPVVKR 334
Query: 561 DEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVVSEDELPEVQKPSI 704
G+ KN+ E+ + + S+ A+++ GA++ + + ++ + S+
Sbjct: 335 KRGRPRKNKLEIGNSVQTSE--ATQVKGAKKPAIRNAKKMSNEKDDSL 380
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 31.1 bits (67), Expect = 0.17
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 625 ESCDCSLISSTSLWFLNSLPSSCLITGSFTGLLHGSTI 512
E C + +TS+W ++SLP+ L+ GS G + T+
Sbjct: 246 ECLQCITLPTTSVWSVSSLPNGDLVCGSSDGFVRIFTV 283
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 30.3 bits (65), Expect = 0.29
Identities = 28/130 (21%), Positives = 54/130 (41%)
Frame = +3
Query: 306 SLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHVNL 485
S N E + + + A L + + T++N N+ N + + T +
Sbjct: 45 SRNQVRREKKKLLREKTNSGAKL-AEKNSDDKDQLTENNDNLYNDKKSNGNFYDTNKTD- 102
Query: 486 NVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVV 665
+VD IV+ DP+I+Q K+ N+ + D ++ +D+ + E++
Sbjct: 103 SVDGMVYTTIVDSVELDPNDPLIEQ--FKDVFNRFKADGQEKDFEDTDKGQIMYSDDEIL 160
Query: 666 SEDELPEVQK 695
SE E +QK
Sbjct: 161 SEGEEDALQK 170
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 30.3 bits (65), Expect = 0.29
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +3
Query: 339 IQSDSASHKAVLDTDSRQS--ESQHATDSNVGEINENSGNDSNFATEHVNLNVDKSEQLE 512
I ++ +S A+ D Q + QH + + + +I + D NF L V +E
Sbjct: 153 IGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNFEVMPKYL-VKSKNPVE 211
Query: 513 IVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVVSEDELPE 686
I +P + ++ P D +F+ QR D+ KE+ + +E T SE E P+
Sbjct: 212 IGQPANCELR-PRDTTDSYHQFQVQRVYDEWKEECALISDVPFSSETTIAESEFEFPD 268
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 29.9 bits (64), Expect = 0.39
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 12/219 (5%)
Frame = +3
Query: 54 ENPMDTDEGPLINENSNGLSHLLTEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAGDYL 233
+ P D D +N+NS+ L + + +D S+S+ + + + L
Sbjct: 55 DTPADVDNSSNVNKNSSSPERELPTSPSHHANTEID--SSSSMLPPPSSDPFSSPLSSSL 112
Query: 234 ENNGPRFSTDSFDIGDNAVTFPNDSLNSALTE--DNSIQSDSASHK---AVLDTDSRQSE 398
+ P+ DS +G+ + P L +++ + D+ + DS + K LDT Q+E
Sbjct: 113 HRSSPKRPHDS--LGEES---PGKLLRTSVKQEPDSEEEIDSPTKKKSFKSLDTSIFQAE 167
Query: 399 SQ--HATDSNVGEINENSGNDSNF-ATEHVNLNVDKSEQLEIVEPCSSPVKDP----VIK 557
Q H S + E +E S D F A+ V +E E + +P K ++
Sbjct: 168 DQFRHPVSSKL-ENSELSEVDKPFIASRRSRKPVSYAESDEDEDFDDAPTKGSRHKRIVS 226
Query: 558 QDEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVVSED 674
DE ++ E D I E S +++ I +E E + ED
Sbjct: 227 DDESDDYV---EPDHISEASSEASLPI---DEVESMDED 259
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 29.9 bits (64), Expect = 0.39
Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 6/157 (3%)
Frame = +3
Query: 51 SENPMDTDEGPLINENSNGLSHLLTEGEF-NSVDAAVDESSTSNQCFLNAVELSAGSA-- 221
+ + M T E LI+ L L+ EF N+ ++ + S NQ ++ ++ + S
Sbjct: 564 ARSSMQTIES-LIHPRFPPLQKHLSPSEFENTFESRFEPVSLENQSHISPPQVDSQSEYK 622
Query: 222 -GDYLENNGPRFSTDSFDIGDNAVTFPND--SLNSALTEDNSIQSDSASHKAVLDTDSRQ 392
L + P F T+S S ++ L +++ S++ ++ L T S
Sbjct: 623 ESSILAPSNPPFETESITDSTEIEGIKESFASTDTGLQNNSTATSENKRSESEL-TMSNV 681
Query: 393 SESQHATDSNVGEINENSGNDSNFATEHVNLNVDKSE 503
++ + EIN + + N T+H+N+ + E
Sbjct: 682 LSNEGDRNEEGSEINSSQPSTINHGTDHINIVSENKE 718
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 29.9 bits (64), Expect = 0.39
Identities = 19/97 (19%), Positives = 43/97 (44%)
Frame = +3
Query: 396 ESQHATDSNVGEINENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKE 575
ES + E+N + ND + ++ N+ + VEP + + V+++ E ++
Sbjct: 350 ESSAGLTDVISELNFTNHNDDS---KNSNITTSNDSPVNEVEPMAPELSSAVVEKKEPED 406
Query: 576 FKNQREVDDIKEQSQDSASKIGGAEETEVVSEDELPE 686
+++ VD+ S +S + +E E+ P+
Sbjct: 407 YESISAVDENTNDSNESLP--SSHDYSESTKENSAPD 441
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 29.5 bits (63), Expect = 0.51
Identities = 36/188 (19%), Positives = 74/188 (39%), Gaps = 1/188 (0%)
Frame = +3
Query: 75 EGPLINENSNGLSHLLTEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAGDYLENNGPRF 254
+G ++NEN +G + ++ D+S +++ +S A D + +
Sbjct: 1846 QGDIVNENDENYEDSEDDGVYEEMEFEDDQSGSADSV------VSEDDADDVMYS----- 1894
Query: 255 STDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGEI 434
D D + F D +++ D+S +++SH V+ D ++Q E
Sbjct: 1895 -----DNDDMNIEFMVDEQDASSQNDDSSFDEASSHGDVISIDEEDLDNQGEEFEWEDED 1949
Query: 435 NENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVD-DIKE 611
N +SG + + + S E +E + D D +E + V+ D E
Sbjct: 1950 NASSGYEDELDYNEDEVGENDSTTFEAMENAFTETSD---NDDHLEEADHVSPVEIDFLE 2006
Query: 612 QSQDSASK 635
++S+S+
Sbjct: 2007 NDENSSSE 2014
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 29.5 bits (63), Expect = 0.51
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +3
Query: 366 AVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKD 545
A LD ++ ES + + S SN ++ + +V K + ++ SSP KD
Sbjct: 83 ARLDLENMFEESSKQSPPSKSPTKNPSKKSSNNSSRRSSSSVGKLSNVSNMQ--SSPSKD 140
Query: 546 PVIKQDEGKE 575
P + QD KE
Sbjct: 141 PFVSQDYEKE 150
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 29.5 bits (63), Expect = 0.51
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 363 KAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHVNLNVDKSEQL-EIVEPCSSPV 539
+A + + S +S S+ T N + + +HV + K+EQL E PV
Sbjct: 544 EAAISSHSSESHSKRTTQQPKSTPNHTNIKVKSERLQHVRMAQQKAEQLDEERSRLREPV 603
Query: 540 KDPVIKQDEGKE 575
+ V K EGKE
Sbjct: 604 QQIVNKWKEGKE 615
>SPAPB1E7.03 |rpc82||DNA-directed RNA polymerase III complex subunit
Rpc82 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 29.1 bits (62), Expect = 0.68
Identities = 20/90 (22%), Positives = 38/90 (42%)
Frame = +3
Query: 231 LENNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHA 410
+ N P F+ + ++ N FPND + D +SAS++ + + +
Sbjct: 311 ISNQSPVFTLTTMELTRN---FPNDIDVESSIVDKQYSVNSASNELRVMEKLNELDELAE 367
Query: 411 TDSNVGEINENSGNDSNFATEHVNLNVDKS 500
D+ ++EN+ S +H+ L D S
Sbjct: 368 EDNYEESVDENANRKSKVLAQHLELLADCS 397
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.1 bits (62), Expect = 0.68
Identities = 26/142 (18%), Positives = 58/142 (40%)
Frame = +3
Query: 300 NDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHV 479
N+S+++ + S S S+ + + S +S+ + +T + + ENS S +
Sbjct: 842 NNSISNVSHRERS-NSVSSKSRETRTSASNESDPKKSTQRDSSKKLENSTVVSGSPSSSS 900
Query: 480 NLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAEETE 659
+ KS + + EP PV+ + + + + D S + + A+ +
Sbjct: 901 KSDAAKSIKPQKPEPALKPVEGTADPKSTKRNHQETEKTADTDVSSTEPVKRQKTADVND 960
Query: 660 VVSEDELPEVQKPSIKDAENVS 725
V E+E+ + + A+ S
Sbjct: 961 DVGEEEVKQSVSEQVDSAQLTS 982
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 28.7 bits (61), Expect = 0.90
Identities = 23/131 (17%), Positives = 56/131 (42%), Gaps = 5/131 (3%)
Frame = +3
Query: 66 DTDEGPLINENSNGLSHLLTEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAG--DYLEN 239
D P EN + + + N ++++++SN + L + + D +++
Sbjct: 269 DNIREPQEEENDVDVDEIFNRQQLNQPALDLNDANSSNSVPVEFNSLHSQNVDYRDEVDS 328
Query: 240 NGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSD--SASHKAVL-DTDSRQSESQHA 410
P+F+ D ++ + ++ A+T+ N I+SD H+ ++ + D ++
Sbjct: 329 LRPQFNVDEQSSISHSSNASENIVDGAVTQANGIESDFTRVDHEPIIVNNDDENGNNESE 388
Query: 411 TDSNVGEINEN 443
+ + E N N
Sbjct: 389 NEEVIEEDNLN 399
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 28.7 bits (61), Expect = 0.90
Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 12/194 (6%)
Frame = +3
Query: 108 LSHLLTEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAGDYLENN-GPRFSTDSFDIGDN 284
+ H G + + D SSTSN+ AG+ Y + N DSF
Sbjct: 931 VQHFSRYGLLDDEEEENDMSSTSNE---------AGNLKKYDQPNLKVSGKNDSFVTHHT 981
Query: 285 AVTFPNDSLNSALTE-----DNSIQSDSA--SHKAVLDTDSRQSESQHAT-DSNVGEINE 440
FPNDS N L D+S D S K LD S + S+ D N +++E
Sbjct: 982 PGAFPNDSKNKELNRHFLKVDDSAPLDDTFMSKKVKLDFSSDSNVSERGDYDDNAKKVDE 1041
Query: 441 NSGNDSNFATEHVNLNVDKSE-QLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQS 617
+ N NV SE L S+ ++++ + + +++DI E+S
Sbjct: 1042 VISIEKVDGYSKEN-NVPLSEDDLSNSSESSNESVYSLVEESDASLAADNMDIEDISEES 1100
Query: 618 --QDSASKIGGAEE 653
++ +S GA++
Sbjct: 1101 DREELSSMRFGAQD 1114
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 0.90
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +3
Query: 144 VDAAVDES-STSNQCFLNAVELSAGSAGDYLENNGPRFSTDSFDIGDNAVTFPN----DS 308
V+ A D + +T+ F V GS G N R D + N+ F D+
Sbjct: 244 VEYAEDSAYNTNTSLFYGVVGHQNGSNGFISPKNLTR---DLLNYKANSTLFGGVTIWDT 300
Query: 309 LNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVG 428
+A++ DNS ++ + +LDT S+ S S+ + DS+ G
Sbjct: 301 SLAAMSYDNSSETFVEAIHKILDTKSKHSSSKSSHDSSQG 340
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 237 NNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAV 371
N P S DSF G + P S S++ +NS+Q A H V
Sbjct: 255 NASPFDSCDSFHSGSSIPIEPVSSRQSSVVNNNSVQQPVAYHAFV 299
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 28.3 bits (60), Expect = 1.2
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Frame = +3
Query: 309 LNSALTEDNSIQSDSASH-KAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHVNL 485
L S L D S S S+ A+ + ++ S +E G E +NL
Sbjct: 1106 LISDLKRDLSALSTVLSNVSAIAELQAKSSIKSKPLTLKTATESEIKGYRDQIQLEVLNL 1165
Query: 486 NVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVV 665
D +L+ +E K ++++ + EF +EV E + +KIGGAEE + +
Sbjct: 1166 KPDSEARLQAIERSELLQKKRLLQRVD--EFS--KEVKTFVEN--EKLNKIGGAEEADRI 1219
Query: 666 SEDELPEVQK 695
+ +V+K
Sbjct: 1220 RTIQDEKVRK 1229
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 27.9 bits (59), Expect = 1.6
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 246 PRFSTDSFDIGDNAVTFPNDSLNSALT---EDNSIQSDSASHKAVLDTDSRQSESQHATD 416
P T SF + + ++ + + S LT +D S+ + +AV D + + A
Sbjct: 521 PVAGTFSFQLHIMSNSYVGEDVISNLTMIVKDTSVLQEQLQEEAVSDLEDNSDIDESANA 580
Query: 417 SNVGEINENSGNDSNFATEHVNLNVDKSE 503
+EN G+D +E+ ++ D S+
Sbjct: 581 GKDFSDDENIGSDEEDESEYDPMDTDTSD 609
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.9 bits (59), Expect = 1.6
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 2/128 (1%)
Frame = +3
Query: 297 PNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATE- 473
P+D + S D+ SDS+ + L S+Q S N G + +TE
Sbjct: 436 PSDEIGSENDSDSDSDSDSSVPLSQLQKKSQQRNSVSHEIQNRGTKGSPKEPKAKPSTER 495
Query: 474 -HVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAE 650
+ + S E+ + S +++P + + + +E E S+ S E
Sbjct: 496 PETHRTLSYSRLSELSKTFSPEIREPSLTKKTAVSMQESKEEGRSDESSESEESGSSSDE 555
Query: 651 ETEVVSED 674
ED
Sbjct: 556 SDNSEKED 563
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/62 (27%), Positives = 37/62 (59%)
Frame = -3
Query: 581 FKLFAFILLNHWIFYWTATWLNNFQLL*FIHI*IYMLSGEVRVIARVFIYLSYIGICCML 402
++ FA++++ ++FYW ++ F+ L + + + + + RV+ ++F Y S +GI L
Sbjct: 331 YRFFAYVMIGSFVFYWFPGFI--FKGLSYFTV-LCWIWPKNRVVNQLFGYNSGLGI-LPL 386
Query: 401 TF 396
TF
Sbjct: 387 TF 388
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +3
Query: 486 NVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVV 665
N+ + E+LE K+ IK + K+FK +++ +KE+S+ E V
Sbjct: 90 NLKEFEELEAPGNEEVKAKEKRIKSPDVKDFKLPKDILKVKEKSEKPLETSQKVEIETVE 149
Query: 666 SEDELPEVQK 695
++ PEV++
Sbjct: 150 TKPGEPEVKQ 159
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +3
Query: 198 VELSAGSAGDYLENNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAV 371
+ L + SA D L+N+GP +T S ++ T+P DSLN+ +S +SAS A+
Sbjct: 157 LSLRSASALDVLKNSGP--ATTSLL---SSTTYPFDSLNAFNEPSHSHVPNSASSTAL 209
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 348 DSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDS 458
D+ +K L+ + Q + HAT SN G + +SG D+
Sbjct: 474 DTRMYKVCLNFTTTQKDINHATISNSGILVTSSGTDN 510
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 27.5 bits (58), Expect = 2.1
Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 3/147 (2%)
Frame = +3
Query: 249 RFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQ---HATDS 419
+ ++ DI N DS+N T +N + AS +A D + QS Q T S
Sbjct: 10 QLQNEAVDINSNDTI---DSINWKNTRNN--HTTQASLQA--DNNDEQSNGQAPFSTTYS 62
Query: 420 NVGEINENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVD 599
+ I++ GN +++ + + +SE E+VE + K + +
Sbjct: 63 EINNIHDVPGNQDEWSSSPIAGIIVESEDEEVVENNLHSQMGTSCNKINSNSNKGKENMH 122
Query: 600 DIKEQSQDSASKIGGAEETEVVSEDEL 680
+ + + DS G A +V +D+L
Sbjct: 123 FVLDDNGDSK---GNASNQQVERDDKL 146
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +3
Query: 201 ELSAGSAGDYLENNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDT 380
+ S G G N P S+D + P S +S+LT++ + S+ D+
Sbjct: 287 DFSKGDRGLSFVNLSPNIKATSYDRLSTVINEPFISRSSSLTDERGLADSGNSYHHFSDS 346
Query: 381 D 383
D
Sbjct: 347 D 347
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 486 NVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQR-EVDDIKEQSQD 623
+VD+ + E + P S PV+ + D G E NQ+ E +I E+ Q+
Sbjct: 181 SVDEENRKERLSPDSDPVETESVYVDNG-ELSNQKVETVEISEKEQN 226
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +3
Query: 489 VDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVVS 668
+ + L++ E DP +++E K + E+ +E ++ +EET
Sbjct: 331 ISLDDNLDVQESLGIFHYDPDYEENEKKYDAIKHEILG-EEDDDENEEDEEDSEETSESE 389
Query: 669 EDELPEVQKPSIKDAENVS 725
EDE +KP + D N S
Sbjct: 390 EDESVNDEKPQVIDQTNAS 408
>SPAPB17E12.10c |||SAM-dependent
methyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 610 SLISSTSLWFLNSLPSSCLI 551
S I+ +S WF NSL SSCL+
Sbjct: 14 SAIARSSSWFNNSLFSSCLL 33
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 26.6 bits (56), Expect = 3.6
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Frame = +3
Query: 303 DSL-NSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGE-INENSGNDSNFATEH 476
DSL SA N I + + +L QS S + N+ + ++ G + F
Sbjct: 174 DSLFQSANDHLNRIAKATQDCRGLLFYSKSQSTSVPSGIINLTDAVSIEPGTGNKFT--- 230
Query: 477 VNLNVDKSEQLEIVEPCS-----SPVKDPVIKQDEGKE-FKNQREVDDIKEQSQDSASKI 638
+N N KSE LE ++P S + +K+ + K+ E K+ K R +D ++ A++
Sbjct: 231 INFNNGKSETLEALDPESKNTWITDLKNAIAKKKETKDKIKELRAYNDTLKRLGKLAARS 290
Query: 639 G-GAEET 656
G A ET
Sbjct: 291 GPSASET 297
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 309 LNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSN 422
L+ LT+D + S K V TD+ S + H T N
Sbjct: 336 LSPCLTDDEQLSKSLTSFKQVNVTDASLSPNSHNTSDN 373
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 324 TEDNSIQSDSASHKAVLDTDSRQSESQHATDSNV 425
TED++ +D ++ + + S SES+HA D+ V
Sbjct: 55 TEDDADDADDVNNYIMSPSSSLSSESEHALDALV 88
>SPAC20G8.01 |cdc17||ATP-dependent DNA ligase
Cdc17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 768
Score = 26.2 bits (55), Expect = 4.8
Identities = 22/109 (20%), Positives = 42/109 (38%)
Frame = +3
Query: 399 SQHATDSNVGEINENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEF 578
SQ V + S S+ + ++ KSE +E+ + S E ++
Sbjct: 6 SQIPRFKQVNQYIRMSTRQSDISNFFISSASHKSEHVEVSQSSSDSKNVDGRSTSEKRKV 65
Query: 579 KNQREVDDIKEQSQDSASKIGGAEETEVVSEDELPEVQKPSIKDAENVS 725
++ + VD+ K + D E +VSE + + S ++ VS
Sbjct: 66 ESVKLVDESKHNNHDDTGTQNVERENNIVSEAKKQKTLGSSSSSSDAVS 114
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 26.2 bits (55), Expect = 4.8
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +3
Query: 438 ENSGNDSNFATEHVNLNVDKSEQ-LEIVEPCSSPVKDPVIKQDEGK--EFKNQREVDDIK 608
EN+ D+N ATE+ NL +++ + I++ + + + +++D GK K+ R ++
Sbjct: 322 ENANVDANHATEN-NLEGQATQKSVSILKGHNKALSNVSLQEDHGKRRNLKSLRSSRNLH 380
Query: 609 EQSQDS 626
+QS+ S
Sbjct: 381 QQSRKS 386
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 204 LSAGSAGDYLENNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQS 347
L +GSA + L + F +D+GD N ++ SA+ ++ SI S
Sbjct: 637 LFSGSAQELLSSIIFVFVKHPYDVGDRVDVMINGTVTSAMVKEISIMS 684
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/89 (16%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 192 NAVELSAGSAGDY-LENNGPRFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKA 368
N+ E + + +Y + +++ + D+ +D +N+ +D+ S S S++
Sbjct: 187 NSYETTYSDSSNYHTSTDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYER 246
Query: 369 VLDTDSRQSESQHATDSNVGEINENSGND 455
D D + E + + +EN ++
Sbjct: 247 DEDVDEEEEEDDDENNDEGDDEDENENDE 275
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 546 PVIKQDEGKEFKNQREVDDIKEQSQDSASKI 638
P ++ E ++FKN + + E DSAS+I
Sbjct: 241 PRLRMQESEQFKNSKNMKSPGEGDLDSASQI 271
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.8 bits (54), Expect = 6.3
Identities = 23/96 (23%), Positives = 37/96 (38%)
Frame = +3
Query: 312 NSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHVNLNV 491
NS T ++ S + +H + S S+ + SNV E ++S SN H N
Sbjct: 4 NSDTTHGQALGS-TLNHTTEVTRISNSSDHFEDSSSNVDESLDSSNPSSNEKASHTNEEY 62
Query: 492 DKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVD 599
+S+ + P SS P + + VD
Sbjct: 63 -RSKGNQSYVPSSSNEPSPESSSNSDSSSSDDSSVD 97
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = -1
Query: 178 LDVDDSSTAASTLLNSPSV---NK*ESPLEFSFIKGPS 74
LD + T AS LL + N E+PL+FS+ KG S
Sbjct: 269 LDWSEMETVASDLLIHSYIAYENNSETPLKFSYAKGVS 306
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 600 DIKEQSQDSASKIGGAEETEVVSE 671
+IKE S DS S +GG + +VS+
Sbjct: 1427 EIKELSVDSTSTLGGLNSSHLVSD 1450
>SPAPB17E12.07c |sen2||tRNA-splicing endonuclease subunit
Sen2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 570 KEFKNQREVDDIKEQSQDSASKIGGAEETEVVSEDELPEVQKPSIKDAENVS 725
K+FK QR + + + + + G + + ELPE S+KD VS
Sbjct: 120 KQFKAQRAYRENRARERQLLLENGKPIPASLEEDAELPEYLTKSLKDFSRVS 171
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.4 bits (53), Expect = 8.4
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 432 INENSGNDSNFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEGKEFKNQREVDDIKE 611
++ENS + NF + +++L+++ ++D K+DE F N E I+
Sbjct: 1 MSENSTDSKNFQFSEGSRE-SSNDELKVL------LRDTETKEDEKSSFSNSEEESIIEN 53
Query: 612 QSQDSASK 635
S S +K
Sbjct: 54 LSDSSVNK 61
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 537 VKDPVIKQDEGKEFKNQREVDDIKEQSQDSASKIGGAEETEVVSED 674
+KD KQ+ E E + E +D+ S+ E TE +D
Sbjct: 10 IKDISSKQENSSEVPKAEEAGKVVESQKDTTSEEKKEETTEKKEDD 55
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 25.4 bits (53), Expect = 8.4
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 333 NSIQSDSASHKAVLDTDSRQSESQHATDSNVGEINENSGNDSNFATEHVNLNVDKSEQLE 512
NS+ H+ + + + S ++ DS+ E +EN + A+E + + S +
Sbjct: 17 NSVNEQHDRHEDLPEVGTT-SVTKIINDSD-NEDDENGMDLGRVASESLEGDAVVSIDIN 74
Query: 513 IVEPCSSPVKDPVIKQDEGKEFKNQRE-VDDIKEQSQDSASKIGGA 647
+ SP K K EG E K Q E + D K+ ++ A+ + A
Sbjct: 75 TEDSSLSPAKQENEKSPEGIEQKYQEEDLKDDKKSNETIATPVPDA 120
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 25.4 bits (53), Expect = 8.4
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 2/142 (1%)
Frame = +3
Query: 174 SNQCFLNAVELSAGSAGDYLENNGPRFST-DSFDIGDNAVTFPNDSLNSALTEDNSIQSD 350
S+Q + + ++A + Y EN+ + + +IGDN + +PN+ + S++S
Sbjct: 97 SSQKPVKNITVNAEAPEVYFENDTLYLANLKNQNIGDNVIPYPNN--KAVKVSAKSLRSC 154
Query: 351 SASHKAVLDTDSRQSESQHATDSNV-GEINENSGNDSNFATEHVNLNVDKSEQLEIVEPC 527
+ S + + + T + G I+ + NDS + S L + C
Sbjct: 155 NISISNCSSVNLHNATKCNFTFPTIQGSIHLSDINDSTICVSCHQFRLHHSTNLRVHLRC 214
Query: 528 SSPVKDPVIKQDEGKEFKNQRE 593
+ PVI++ + F + E
Sbjct: 215 KT---SPVIEESKEISFSYKDE 233
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 309 LNSALTEDNSIQSDSASHKAVLDTDSRQSESQHATDSNVGE 431
LN L +N +Q+D+ +D D +++ + VGE
Sbjct: 344 LNPILRSENVLQNDNHHSSLSMDNDPTNVSTKNRNNQTVGE 384
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 636 IGGAEETEVVSEDELPEVQKPSIKDAENVS 725
+ G+E T+ +S++ E +KP++ DA + S
Sbjct: 405 VSGSERTKSLSKESPVEPEKPALPDATSSS 434
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,919,358
Number of Sequences: 5004
Number of extensions: 61854
Number of successful extensions: 321
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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