Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2182
(730 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 31 0.048
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 27 0.59
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 26 1.4
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 25 1.8
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 3.2
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 24 4.2
AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione S-tran... 23 7.3
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 23 7.3
AY344825-1|AAR02436.1| 153|Anopheles gambiae peritrophin A prot... 23 9.7
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 30.7 bits (66), Expect = 0.048
Identities = 32/150 (21%), Positives = 54/150 (36%), Gaps = 3/150 (2%)
Frame = +3
Query: 60 PMDTDEGPLINENSNGLSHLL-TEGEFNSVDAAVDESSTSNQCFLNAVELSAGSAGDYLE 236
P+ + GP N GL GE D + + S N V E
Sbjct: 33 PLHANYGPGSNNGQEGLKGPGGARGELKQFDLPLGNTGNSGNNNNNGVGNHQQQPSPVNE 92
Query: 237 NNGP--RFSTDSFDIGDNAVTFPNDSLNSALTEDNSIQSDSASHKAVLDTDSRQSESQHA 410
G + ++ + G N N ++A ++S+ + S S A T + +
Sbjct: 93 GTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTTTPTNPG--- 149
Query: 411 TDSNVGEINENSGNDSNFATEHVNLNVDKS 500
+ N G N N+ N S+ HV+ N + +
Sbjct: 150 -NGNGGSNNNNNSNSSSSCNNHVSSNTNNN 178
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 27.1 bits (57), Expect = 0.59
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 634 LLAESCDCSLISSTSLWFLNSLPSSCLITGSFT 536
L D LI+ T W ++++PS+ L +F+
Sbjct: 99 LAVSEADFDLIALTETWLVDNIPSALLFNNNFS 131
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 25.8 bits (54), Expect = 1.4
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 659 FCFFSTTNLTC*VL*LFFDIIY-FSLVFKLFAF 564
+CF S + L C + LF + I+ F L F LF+F
Sbjct: 36 YCFVSPSCLECSSVPLFINFIFMFLLHFVLFSF 68
Score = 23.4 bits (48), Expect = 7.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 277 PMSKESVLKRGPLFS 233
P KES+L+RG LFS
Sbjct: 1059 PGQKESLLQRGDLFS 1073
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 25.4 bits (53), Expect = 1.8
Identities = 18/76 (23%), Positives = 30/76 (39%)
Frame = +3
Query: 138 NSVDAAVDESSTSNQCFLNAVELSAGSAGDYLENNGPRFSTDSFDIGDNAVTFPNDSLNS 317
NSV AV ++ + AGS G+ ++ GP S +N S ++
Sbjct: 487 NSVATAVAVGGSARSLDSLSSNTIAGSTGERFQDLGPAASESVRSQSNNTTVVSTPSSST 546
Query: 318 ALTEDNSIQSDSASHK 365
+ + S S+S K
Sbjct: 547 TSSSSTTSSSSSSSSK 562
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 3.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 375 DTDSRQSESQHATDSNVGEINEN 443
D+DS SES ++D + G + N
Sbjct: 45 DSDSSSSESSQSSDDDSGSVERN 67
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 24.2 bits (50), Expect = 4.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 113 RKSVGVLIYQRTFVCIHGIFRSFL*VYLYVT 21
RK V Y F+ HG FRS+L Y + +
Sbjct: 874 RKHGEVNFYMTQFLSDHGCFRSYLHKYRHAS 904
>AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione
S-transferase u1 protein.
Length = 233
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 459 NFATEHVNLNVDKSEQLEIVEPCSSPVKDPVIKQDEG 569
N EHV+++ K+E L +P K+ + D+G
Sbjct: 23 NIPYEHVSVDYGKAEHLTAEYEKMNPQKEIPVLDDDG 59
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 23.4 bits (48), Expect = 7.3
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 6/38 (15%)
Frame = +3
Query: 495 KSEQLEIVEPCSSPV-----KDP-VIKQDEGKEFKNQR 590
KSE E++E + V ++P VI+ D+G E+K++R
Sbjct: 115 KSEAAEVIEEYVTMVHNRFGRNPIVIRSDQGGEYKSKR 152
>AY344825-1|AAR02436.1| 153|Anopheles gambiae peritrophin A
protein.
Length = 153
Score = 23.0 bits (47), Expect = 9.7
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 643 PPILLAESCDC 611
PP+LLA S DC
Sbjct: 30 PPVLLAHSTDC 40
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,157
Number of Sequences: 2352
Number of extensions: 15092
Number of successful extensions: 76
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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