Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2181
(341 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 0.80
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 0.80
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 1.8
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 26 1.8
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 2.4
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 2.4
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 2.4
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 3.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 3.2
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 4.3
SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein Rpp1-1|Sc... 25 4.3
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 25 4.3
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 24 5.6
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 24 5.6
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 24 7.5
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 24 7.5
SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces p... 23 9.8
SPAC1B3.07c |vps28||ESCRT I complex subunit Vps28|Schizosaccharo... 23 9.8
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 23 9.8
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 23 9.8
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 23 9.8
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 0.80
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 2 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 124
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 0.80
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 2 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 124
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 1.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 11 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 157
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1191 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1238
Score = 25.8 bits (54), Expect = 1.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 11 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 157
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1273 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1320
Score = 24.2 bits (50), Expect = 5.6
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 11 QSPLLTVRDCTASSLMKTSATFSGTAGTEK--PPAISAAPDLPTTESPAS 154
Q+ T T ++ ++T+ +GTAGTE A P TE+ +S
Sbjct: 1355 QATTATETQATTATEVQTTTGATGTAGTETQVTTATEVQPTTAVTETSSS 1404
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.8 bits (54), Expect = 1.8
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 71 TFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLAR 250
T +G+ T+ PA+ P PA +S+ T+ + + PP RSP
Sbjct: 663 TTTGSILTQSSPALPVQPVPLAYSKPAPTT-----KSSLTELAYNTNVSLPP-RSPGTGS 716
Query: 251 SAVTLIP-KIAVNITSVSRGGPVP 319
A +P + A ++ ++ GGPVP
Sbjct: 717 LAAGNLPNEKAPSLMTMVNGGPVP 740
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 2.4
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 92 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT-LARSAVTLI 268
T P S +LPT + S +S + QT +PP SPT + ++ ++
Sbjct: 135 TTFPSTTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPP--SPTSITTTSTSID 192
Query: 269 PKIAVNITS 295
P +A + S
Sbjct: 193 PSVAFSSKS 201
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 2.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 203 TDSAAQPPVRSPTLARSAV 259
++SAA PPV SP L RS +
Sbjct: 479 SNSAASPPVSSPGLRRSHI 497
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 2.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 49 FPDENKCDVFWNCW 90
F D N D +WNCW
Sbjct: 350 FADRNFYDDWWNCW 363
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 3.2
Identities = 23/95 (24%), Positives = 39/95 (41%)
Frame = +2
Query: 41 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 220
TA+S + +SAT S T+ + + D+ T PAS+ T + S+
Sbjct: 157 TANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFS-TITNTSMIPSSSSFT 215
Query: 221 PPVRSPTLARSAVTLIPKIAVNITSVSRGGPVPNS 325
SP S + +P ++ S+S +P S
Sbjct: 216 TTTGSPYYNTS--SFLPSSVISSASLSSSSVLPTS 248
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 3.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 203 TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRGGPVPNS 325
+DSA+ PPV ++ RS V+ P+ I SV P+P++
Sbjct: 509 SDSASPPPVPRLSITRSQVSREPEKPEEIPSVP---PLPSN 546
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 24.6 bits (51), Expect = 4.3
Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 1/108 (0%)
Frame = +2
Query: 14 SPLLTVR-DCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKT 190
SPL T CT S+ + + + PP +++ P + S+ G T
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335
Query: 191 KK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRGGPVPNSPYS 334
T S + PP S + P + TS + P P S S
Sbjct: 336 STSCTTSTSIPPT-----GNSTTPVTPTVPPTSTSSTSTPPPPASTSS 378
>SPAC644.15 |rpp101|rpp1-1|60S acidic ribosomal protein
Rpp1-1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 109
Score = 24.6 bits (51), Expect = 4.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 144 LSVVGKSGAALIAGGFSVPAVPENVALVFIREDA 43
L++ +GAA +AGG + PA + A +E+A
Sbjct: 60 LNIGSGAGAAPVAGGAAAPAAADGEAPAEEKEEA 93
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 24.6 bits (51), Expect = 4.3
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +1
Query: 34 RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAY 135
+L G D N C V CWN R + + Y
Sbjct: 93 QLEGTETDTNACTVVVGCWNKWLERVEIVQNIFY 126
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 24.2 bits (50), Expect = 5.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 77 SGTAGTEKPPAISAAPDLPTTESP 148
+ T TE PPA+ PTTE P
Sbjct: 521 ASTQPTENPPAMPDHNGSPTTEPP 544
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 24.2 bits (50), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 26 TVRDCTASSLMKTSATFSGTAGTEKPPAISAAPD 127
T R TASSL TS T G+ ++A PD
Sbjct: 495 TSRTNTASSLSSTSEDQVSTHGSISSAKVTAIPD 528
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 23.8 bits (49), Expect = 7.5
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 2 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEK--PPAISAAPDLPTTES 145
L+P + + D ++S + TSA+ S + T PA S+A LP S
Sbjct: 153 LTPSTTDSSSTDVSSSDSVSTSASSSNASNTVSVTSPASSSATPLPNQPS 202
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 23.8 bits (49), Expect = 7.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 97 EASRYQCSPGLAYDRESRVC 156
E + +C PG+ YD +R C
Sbjct: 391 EHQKQRCLPGIQYDGYARFC 410
>SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 226
Score = 23.4 bits (48), Expect = 9.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 169 QVPECKNEEVANGFGCP 219
Q+ CK EE +N F CP
Sbjct: 149 QLYSCKKEESSNKFLCP 165
>SPAC1B3.07c |vps28||ESCRT I complex subunit
Vps28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 23.4 bits (48), Expect = 9.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 59 KTSATFSGTAGTEKPPAISAAPDLPTTESPASA 157
++++TFS T P+I+ P T +P A
Sbjct: 113 QSNSTFSNAISTTAEPSIAMNDTTPQTVNPTKA 145
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 23.4 bits (48), Expect = 9.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 120 AALIAGGFSVPAVPENVALVF 58
A + G S+P +P+N LVF
Sbjct: 333 APMAYGNQSIPGIPKNSTLVF 353
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 23.4 bits (48), Expect = 9.8
Identities = 18/74 (24%), Positives = 32/74 (43%)
Frame = +2
Query: 41 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 220
T+SSL +SAT S A + + A+ + ++ +S+ S+ T S++
Sbjct: 105 TSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSST 164
Query: 221 PPVRSPTLARSAVT 262
S T SA +
Sbjct: 165 NSTTSATPTSSATS 178
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 23.4 bits (48), Expect = 9.8
Identities = 6/19 (31%), Positives = 15/19 (78%)
Frame = +3
Query: 171 GSGVQKRRSSKRIRLPSPR 227
G G++++R ++++ PSP+
Sbjct: 124 GEGLERKREHEKLQAPSPK 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,505,622
Number of Sequences: 5004
Number of extensions: 28523
Number of successful extensions: 108
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 100068878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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