Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2181
(341 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 36 0.011
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 31 0.24
09_06_0280 + 22010270-22011407,22011890-22013097 30 0.55
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 29 1.3
04_03_0362 + 14934236-14934541,14935549-14935647,14935736-149357... 29 1.3
03_05_1129 - 30595580-30595771,30596119-30597162 28 1.7
09_04_0681 + 19416207-19416515,19416537-19416756,19416848-19417455 27 2.9
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 27 2.9
03_06_0069 - 31449319-31450368 27 2.9
03_01_0092 - 731069-731434,731569-733080 27 2.9
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 27 2.9
01_06_0646 - 30832201-30832838,30833643-30833838,30833975-308341... 27 3.9
09_04_0654 - 19247051-19247305,19247466-19247534,19247618-192477... 27 5.1
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 27 5.1
03_02_0502 - 8934646-8934834,8934974-8935121,8935228-8935304,893... 27 5.1
02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672... 27 5.1
11_06_0046 - 19585032-19585109,19585198-19585278,19585460-195855... 26 6.7
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 26 6.7
06_03_0395 - 20354713-20355570 26 6.7
06_01_0613 + 4439829-4439917,4440650-4440738,4441219-4441453,444... 26 6.7
05_07_0096 - 27663415-27664086 26 6.7
04_04_0622 + 26663471-26663620,26663822-26664384,26664483-266646... 26 6.7
04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911 26 6.7
01_05_0287 - 20460956-20461282,20462051-20462201,20462285-204625... 26 6.7
01_01_0946 - 7442907-7443284,7443797-7445122 26 6.7
01_01_0070 - 542603-542686,542803-543441 26 6.7
10_08_0076 + 14685364-14686468,14686521-14686540,14686614-146867... 26 8.9
07_03_0439 + 18212584-18213065,18214164-18215010 26 8.9
06_02_0210 - 13039479-13039566,13039674-13039770,13040470-130405... 26 8.9
05_07_0219 - 28474661-28475146,28475979-28476644 26 8.9
03_02_1009 + 13189349-13189592,13189782-13189882,13191085-131910... 26 8.9
03_02_0187 - 6248226-6249226,6249296-6250148 26 8.9
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 26 8.9
02_03_0265 + 17066253-17066501,17067102-17068121 26 8.9
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 26 8.9
02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467 26 8.9
02_01_0200 + 1344755-1345115,1346229-1346366,1346505-1346752 26 8.9
01_06_1431 + 37317248-37317907 26 8.9
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 35.5 bits (78), Expect = 0.011
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +2
Query: 41 TASSLMKTSATFSGT-AGTEKPPAI-SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 214
T SS+M++SAT GT A + P A+ SA P P T +P + S T + TDSA
Sbjct: 152 TDSSMMQSSAT--GTQAAVQGPSAVASAVPMTPVTAAPTTV------PSTTTARAGTDSA 203
Query: 215 AQPPVRSPTLARSAVTLIPKIAVNITSVSRGGPV-PNSPYSE 337
T S V + P + V T+ S+G + P +P +E
Sbjct: 204 IAVASAGSTTV-STVAVAPSLPVAPTAASQGQALAPQTPTAE 244
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 31.1 bits (67), Expect = 0.24
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Frame = +2
Query: 59 KTSATFSGTAGTEKPPAISAAPDL-PTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRS 235
K T GT++PP I +P P SP + I S + +PPV S
Sbjct: 191 KNDIELGSTDGTDRPPRIPVSPSRPPVVASPRDS--PIASPSRPEPPVASPPGPEPPVAS 248
Query: 236 PTLARSAVTLIPKIAVNITS-VSRGGPVPNSP 328
P + V P + + S + P+P+ P
Sbjct: 249 PPVPEPQVASPPVLEPPVASPQTEKDPMPDQP 280
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 29.9 bits (64), Expect = 0.55
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 187 NEEVANGFGCPAPGEVSNAGSFSRHAH----PEDCRKYYIC 297
N + AN + CP PGE + S +++ ++ R Y+C
Sbjct: 275 NNQAANNWSCPTPGEARRSACISNNSYCHNVTDNYRSGYVC 315
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 5 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 154
+PQ+ +VR CT+ SL + SA GTA T + A SA +T S +S
Sbjct: 51 APQAAASSVRRCTSPSLSRASAA-EGTASTNR--AQSAERRRSSTPSSSS 97
>04_03_0362 +
14934236-14934541,14935549-14935647,14935736-14935798,
14935878-14935940,14937242-14937362,14937472-14937872,
14937968-14938141,14938252-14938570,14938659-14938735,
14938808-14938877,14938951-14939007,14939100-14939314,
14939436-14939561,14939649-14939944,14940032-14940203,
14940300-14940398,14940471-14940602,14940692-14940792,
14941391-14941580,14941819-14941842
Length = 1034
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +1
Query: 85 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHA 264
CW G + RY+CSP VCM ++P + + P EV + G H
Sbjct: 77 CWRGLSRRYKCSPERTV---LSVCMLTGEMPRVQTSRLGKN-----PIEVDSDGGEDLHV 128
Query: 265 HPE 273
E
Sbjct: 129 DYE 131
>03_05_1129 - 30595580-30595771,30596119-30597162
Length = 411
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 143 SPASACGLIRFRSAKTKK*QTDSA-AQPPVRSPTLARSAVTLIPK-IAVNITSVSRGGPV 316
SP+ A L R + T + + A A PP S AR VTL P+ +A T+ + P
Sbjct: 175 SPSGAWSLRDVRGSPTGSIEVELASAAPPEASGVEARCVVTLHPEALATEFTARNAASPS 234
Query: 317 P 319
P
Sbjct: 235 P 235
>09_04_0681 + 19416207-19416515,19416537-19416756,19416848-19417455
Length = 378
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 74 FSGTAGTEKPPAISAAPDLPTTESPAS 154
F+G AG PPA+S +P +P S
Sbjct: 334 FAGAAGFHAPPAVSVRSVIPVCAAPPS 360
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 27.5 bits (58), Expect = 2.9
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = +2
Query: 14 SPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGL-IRFRSAKT 190
SPLL++R T ++ + +SA F G PA+SAA S A+A + +S T
Sbjct: 28 SPLLSIRTGTGTARLPSSAVFGGFT-----PALSAAHSRARFVSSATADPKEVDLQSKIT 82
Query: 191 KK*QTDSAAQPPVRSPTLARSAVTL----IPKIAVNITSVSRG 307
K D + PV + R + L +P+ A N ++ G
Sbjct: 83 NKVYFDISIGNPV-GKNVGRVVIGLYGDDVPQTAENFRALCTG 124
>03_06_0069 - 31449319-31450368
Length = 349
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 41 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 154
+A S + +A S T G + PP AAP++ PA+
Sbjct: 296 SALSSVSAAAPTSNTVGMDLPPVSLAAPEMQYWNGPAA 333
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +2
Query: 68 ATFSGTAGTEKPPAISAAPDLPTTESPASACGL--IRFRSAKTKK*QTDSAAQPP 226
A A T +PP +S AP PA+ GL +R ++ AA PP
Sbjct: 45 ALHGAAAATARPPPVSLAPAPVAVAPPATPAGLSALRVHASPPPPPVKQHAAPPP 99
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 68 ATFSGTAGTEKPPAISAAPDLPTTESPASACGL 166
A SGTA T P S+AP P+T +P A +
Sbjct: 489 ANSSGTANTAGPSP-SSAPSTPSTHTPGDAMSM 520
>01_06_0646 -
30832201-30832838,30833643-30833838,30833975-30834126,
30834258-30834303,30834992-30835216,30835374-30835414,
30835705-30835834,30835951-30836019,30836254-30836307,
30836389-30836547,30836854-30836991,30837079-30837141,
30837225-30837264,30837369-30837415,30838062-30838373
Length = 769
Score = 27.1 bits (57), Expect = 3.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 65 SATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRS-AKTKK*QTDSAAQPP 226
SA G+ EKP S A + +P+ + L+ FRS ++ KK + A+PP
Sbjct: 690 SADDHGSPQREKPRTTSTAGGVKRDVAPSWSSRLLAFRSFSRDKKAKATVDARPP 744
>09_04_0654 -
19247051-19247305,19247466-19247534,19247618-19247705,
19248010-19248105,19248650-19248763,19248852-19248985,
19249880-19250326
Length = 400
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 178 ECKNEEVANGFGCPAPGEV-SNAGSFSRHAHPEDCRKYYICLE-GGPGTQ 321
EC+++++ + GE S+ GS HPE+ R++ CL G G +
Sbjct: 338 ECQHDDIVDSLTYIEEGEEKSSNGSAFAAPHPEEQRQFLHCLRFAGNGNE 387
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 SRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN-EEVAN 204
+R+YG F DE K W + C P A + +CM P+ KN +++ N
Sbjct: 145 NRIYGFF-DECKRRFNVRIWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLKNMDQIRN 202
>03_02_0502 -
8934646-8934834,8934974-8935121,8935228-8935304,
8935427-8935497,8935594-8935680,8935852-8936316,
8936406-8936880
Length = 503
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 59 KTSATFSGTAGTEKPPAISAAPDLPT 136
+TS TFS AG+E+P +I +LPT
Sbjct: 187 QTSGTFSD-AGSERPHSIDILTELPT 211
>02_05_0969 +
33165396-33165935,33166352-33166883,33166988-33167242,
33167515-33167606,33167745-33167942,33168049-33168240,
33168341-33168562,33168858-33169024,33169117-33169210,
33169308-33169364,33169459-33169587,33169681-33169752,
33170180-33170293,33170419-33170580,33170666-33170794,
33171057-33171158,33171266-33171342,33171470-33171592,
33171666-33172227
Length = 1272
Score = 26.6 bits (56), Expect = 5.1
Identities = 23/60 (38%), Positives = 26/60 (43%)
Frame = -3
Query: 222 GWAAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAGGFSVPAVPENVALVFIREDA 43
G AA V YF A A AG + SGA L +VPA+P VA RE A
Sbjct: 65 GVAATPVAYFAAAAAALAPLARAGAGAADRHVSGALLAFLSAAVPALPPAVARARGREVA 124
>11_06_0046 -
19585032-19585109,19585198-19585278,19585460-19585501,
19586058-19586149,19586243-19586312,19587140-19587223,
19587696-19587770,19587878-19587949,19588082-19588331,
19590224-19590291,19590380-19590460,19590642-19590683,
19591240-19591331,19591425-19591494,19592322-19592405,
19592878-19592952,19593060-19593131,19593264-19593305
Length = 489
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 117 QPRTCLRQRVPRLHVG*SGSGVQKRRSSKRIRLPSP 224
+P C + +P+LH+ S ++RR S + LPSP
Sbjct: 228 EPFICFARYLPQLHLSTSSRHRRRRRGSPPL-LPSP 262
>09_06_0147 +
21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +2
Query: 59 KTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSP 238
K + T S T P +SA+P P E P A L S + + T + P +
Sbjct: 250 KHTRTKSQTILVPPPDTVSASPTAPQGEQPPPADSLSEKASVFSSQSTTHKSIASPSKKN 309
Query: 239 TLARSAVTLIPKIA 280
T + ++ P A
Sbjct: 310 TSSTPSLGNFPSTA 323
>06_03_0395 - 20354713-20355570
Length = 285
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 101 PPAISAAPDLPTTESPASACGLIRFRSAKT 190
PP +AAP TT+ PA+A + R T
Sbjct: 78 PPQTAAAPSPSTTKQPATAAAVTNRRRQPT 107
>06_01_0613 +
4439829-4439917,4440650-4440738,4441219-4441453,
4441768-4441771,4441829-4441930
Length = 172
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 150 RLHVG*SGSGVQKRRSSKRIRLPSPR 227
RL +G G G +RRS R R SPR
Sbjct: 103 RLRIGSGGLGSGRRRSRSRSRSRSPR 128
>05_07_0096 - 27663415-27664086
Length = 223
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 123 GAALIAGGFSVPAVPENVALVFIREDAVQSRTVR 22
GA + GG V + V V R DA++ RTV+
Sbjct: 152 GAVAVGGGIDVDGIVGRVRGVLGRADALRLRTVK 185
>04_04_0622 +
26663471-26663620,26663822-26664384,26664483-26664675,
26664801-26664865,26665182-26665398,26665485-26665823
Length = 508
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 101 PPAISAAPDLPTTESPASAC 160
PPA + APD SP+S+C
Sbjct: 91 PPAPAPAPDAAAAASPSSSC 110
>04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911
Length = 575
Score = 26.2 bits (55), Expect = 6.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 324 ELGTGPPLETDVIFTAIFGMSVTAERASV-GDLTGGWAAESVCYFFVFAL 178
+LGTG L D + F ++ E+ + L+G W A VC F++ L
Sbjct: 234 DLGTGN-LTDDFQTESYFKLTSALEKCKMLRSLSGFWDASPVCLSFIYPL 282
>01_05_0287 -
20460956-20461282,20462051-20462201,20462285-20462519,
20462796-20463006,20463122-20463258,20463339-20463467,
20464558-20465359
Length = 663
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 8/68 (11%)
Frame = +1
Query: 103 SRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPA--------PGEVSNAGSFSR 258
+R +C+PG A + + + + + ANGFG A P V G R
Sbjct: 28 ARQECAPGGAVSGPALADNFVPAMDDLNSNVSANGFGTSAVGTTAGLNPNAVFGLGQCYR 87
Query: 259 HAHPEDCR 282
P DC+
Sbjct: 88 DLSPVDCK 95
>01_01_0946 - 7442907-7443284,7443797-7445122
Length = 567
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 206 DSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRGGPVPNSPYSES 340
D+ + P+ P L +VTL PKI I + G + ++P S
Sbjct: 218 DAKEKYPLIEPVLVNPSVTLTPKITGMIEATLAGLEMEHTPVMSS 262
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 26.2 bits (55), Expect = 6.7
Identities = 23/78 (29%), Positives = 32/78 (41%)
Frame = +2
Query: 92 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIP 271
T PP A +LP E+P + R ++ + KK A P P + L P
Sbjct: 143 TTPPPVAEAPAELPPAEAPTKSKNKHRKKNKRGKK------ASAPAPEPLSPPAPAALSP 196
Query: 272 KIAVNITSVSRGGPVPNS 325
A N VS GP P++
Sbjct: 197 --ADNQADVS--GPAPSA 210
>10_08_0076 +
14685364-14686468,14686521-14686540,14686614-14686749,
14687537-14687664,14687742-14687855
Length = 500
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 210 ESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAGGFSVPAVPENVAL 64
+ C+ F+ +L NL + GL + +S +L+ F V A+P N L
Sbjct: 322 KKACFSFLGSLENLSAVVTGDGLEHLSRSYPSLMKELFVVMALPPNHVL 370
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 25.8 bits (54), Expect = 8.9
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +2
Query: 8 PQSPLLTVR-DCTASSLMKTSATFSGT---AGTEKPPAISAAPDLPTTESPASACGLIRF 175
P SP ++ D + +A S T A + PP+ ++A L T S G R
Sbjct: 25 PPSPTVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEPLHTCVFSGSVAGPSRQ 84
Query: 176 RSAKTKK*QTDSAAQPPVRSPTLAR 250
+ Q A+P + +P LAR
Sbjct: 85 AALSYLTTQPSRMARPLLAAPHLAR 109
>06_02_0210 -
13039479-13039566,13039674-13039770,13040470-13040545,
13041222-13041356
Length = 131
Score = 25.8 bits (54), Expect = 8.9
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +2
Query: 65 SATFSGTAGTEKPPAISAAPDLPTTES---PASACGLIRFRSAKTKK*QTDSAAQPPVRS 235
+AT S TA PP + P S P S RF+S KTK + D + P +
Sbjct: 2 AATSSLTATAASPPLLLKPAPSPLAASFLRPVSRFS--RFQSVKTKATENDQTEKSPPKG 59
Query: 236 PTL 244
+L
Sbjct: 60 SSL 62
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +2
Query: 83 TAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTL 244
TA PP +SA P SPA++ R +A T PP S TL
Sbjct: 72 TAPPPSPPPLSATTPHPPPPSPATSSS--RTATATATATPTSPTPTPPPTSATL 123
>03_02_1009 +
13189349-13189592,13189782-13189882,13191085-13191090,
13191712-13191933,13192052-13192137,13192330-13192426,
13192817-13192909,13193031-13193186
Length = 334
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 41 TASSLMKTSATFSGTAGTEKPPAISAAPDL 130
T+S SAT +GT G + PP + + PD+
Sbjct: 51 TSSFPAAASATAAGTGG-DAPPIVGSCPDM 79
>03_02_0187 - 6248226-6249226,6249296-6250148
Length = 617
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 248 EPALETSPGAGQPNPFATSSF 186
EPAL PG GQ NP ++
Sbjct: 322 EPALAAEPGTGQLNPLNPKTY 342
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 150 RLHVG*SGSGVQKRRSSKRIRLPSPR 227
RL +G G G KRRS R R SP+
Sbjct: 102 RLRIGPGGLGSGKRRSRSRSRSRSPQ 127
>02_03_0265 + 17066253-17066501,17067102-17068121
Length = 422
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 23 LTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP--DLPTTESPASA 157
+ +R + L SA FS A E PP I+ A +LP +PA+A
Sbjct: 1 MRIRRAASRLLGSASAAFSAQA--EAPPVIATATASELPPPPAPAAA 45
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 83 TAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA-AQPPVRSP 238
+ GT+ PAI+ A +PA+A +A ++ T++A A+P SP
Sbjct: 346 STGTKSQPAITEAAPATAEAAPAAATATAAPPAAPVEETSTEAAPAEPTPLSP 398
>02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467
Length = 421
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 242 ALETSPGAGQPNPFATSS 189
A+E SPGAG P+ FA S
Sbjct: 250 AVERSPGAGAPSSFAVLS 267
>02_01_0200 + 1344755-1345115,1346229-1346366,1346505-1346752
Length = 248
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 65 SATFSGTAGTEKPPAISAAPDLP 133
+A+ EKPPA +AAP LP
Sbjct: 67 AASNGAAVKAEKPPAAAAAPPLP 89
>01_06_1431 + 37317248-37317907
Length = 219
Score = 25.8 bits (54), Expect = 8.9
Identities = 27/91 (29%), Positives = 36/91 (39%)
Frame = +2
Query: 5 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSA 184
SP+ P + R S++ +A S +PP LP SP S S+
Sbjct: 48 SPERPQPSRRPLILSAVR--AANPSPLPRLRRPPE-GILDALPERRSPFSPPPSSSSNSS 104
Query: 185 KTKK*QTDSAAQPPVRSPTLARSAVTLIPKI 277
T +AA PP PT+ R A L P I
Sbjct: 105 TTAS-PAAAAAAPPRLIPTIPRPAAALAPHI 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,482,207
Number of Sequences: 37544
Number of extensions: 254995
Number of successful extensions: 1063
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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