Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2181
(341 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 38 0.003
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.007
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 36 0.011
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 35 0.015
SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24) 35 0.020
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 33 0.080
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.18
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.24
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 30 0.43
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.75
SB_58783| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.99
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.99
SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07) 29 1.3
SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6) 29 1.3
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 1.3
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 28 2.3
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34) 28 2.3
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 27 3.0
SB_57471| Best HMM Match : TatC (HMM E-Value=0.27) 27 3.0
SB_35959| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 27 3.0
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_16558| Best HMM Match : SoxE (HMM E-Value=8.2) 27 4.0
SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_44336| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_23692| Best HMM Match : Ribosomal_S26e (HMM E-Value=3.3) 27 4.0
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_15447| Best HMM Match : C1_1 (HMM E-Value=0.11) 27 5.3
SB_12922| Best HMM Match : MFS_1 (HMM E-Value=1.1) 27 5.3
SB_51347| Best HMM Match : CBM_14 (HMM E-Value=4.5e-08) 26 7.0
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 26 7.0
SB_7051| Best HMM Match : RVT_1 (HMM E-Value=0.064) 26 7.0
SB_3701| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_1435| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 22 8.6
SB_35277| Best HMM Match : WIF (HMM E-Value=9.8e-06) 26 9.2
SB_53060| Best HMM Match : ResIII (HMM E-Value=0.14) 26 9.2
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 26 9.2
SB_25197| Best HMM Match : TatC (HMM E-Value=1.8) 26 9.2
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_4058| Best HMM Match : PSP1 (HMM E-Value=0.79) 26 9.2
SB_870| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09) 26 9.2
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 44.8 bits (101), Expect = 2e-05
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Frame = +1
Query: 10 PISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 186
P +P C + G + D + C+ F C NG A + C L +D + C W ++V CK
Sbjct: 591 PPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKV-NCK 649
Query: 187 NEEVANGFGC-PAP----GEVSNAGSFSRHAHPEDCRKYYICLEG 306
+ + P P E R+ P +C Y +C G
Sbjct: 650 SRPTTVPYVTKPTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGG 694
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 7 PPISTPHC-SRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 174
P +P C + G + D N C+ F C NG C L YD C WAD V
Sbjct: 511 PFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTV 567
Score = 35.9 bits (79), Expect = 0.009
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 7 PPISTPHCS-RLYGIFPDENKCDVFWNCWNG-EASRYQCSPGLAYDRESRVCMWADQVPE 180
P + + C+ R G + D + C+++ C NG + C GLA++ +C + VP
Sbjct: 309 PLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPG 368
Query: 181 CKNEEVANGF 210
C +GF
Sbjct: 369 CSGSS-GSGF 377
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 43 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 174
GI+ ++ C F C G A + C PGL ++ + VC W+ +V
Sbjct: 464 GIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 36.3 bits (80), Expect = 0.007
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 13 ISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQ 171
+S+ C + G++ DE F C+NG +C+ GL ++ + ++C DQ
Sbjct: 2 LSSNFCKVKTSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 35.5 bits (78), Expect = 0.011
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 52 PDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMW 162
PD C +++C G+A R C PG +D C W
Sbjct: 32 PDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNW 68
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 35.1 bits (77), Expect = 0.015
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 13 ISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 177
+ST +R G +P + C ++ C NG A C GL ++ E + C W P
Sbjct: 82 LSTICKNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAP 136
>SB_26497| Best HMM Match : DUF963 (HMM E-Value=0.24)
Length = 889
Score = 34.7 bits (76), Expect = 0.020
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Frame = +2
Query: 2 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRS 181
++P S + + C + TS+ S AGT++PP + AP P ++ G F
Sbjct: 379 VAPTSLFGSAKSCAPETKTTTSSN-SLLAGTQQPPTTTTAPVFGQPGKPVASLGTGLFGQ 437
Query: 182 AKTKK*QTDSAAQPPV-------RSPTLARSAVTLIPKIAVNITSVSRGGPVPNSPYSES 340
A+T + T + + + S T +R ++ P + S S GP P + S
Sbjct: 438 AETAETSTTAVSTQSISQAVSAPSSSTPSRVPISAAPPAGGGLFSGSSFGPASQPPSTGS 497
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 32.7 bits (71), Expect = 0.080
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +2
Query: 95 EKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA---AQP--PVRSPTLARSAV 259
E P + AP + + P+ A R ++AKT+ QTDS+ ++P PV SPT + +
Sbjct: 472 EVPVQLEQAPSVEAGQEPSPAEFWSRLKNAKTQSKQTDSSPSTSKPATPVTSPTEGKQSH 531
Query: 260 TLIP 271
+ +P
Sbjct: 532 SQLP 535
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 10 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGL 129
P++ C ++YG+ C W GE +R+Q +PG+
Sbjct: 100 PLAANPCRQVYGVPLGGIGCGTIGRGWRGEFNRWQLTPGI 139
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 67 CDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPG 228
C F +C N AS C GL Y+ +++ C W V +C + G G G
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DCPMGNLDCGVGIVGGG 143
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 30.3 bits (65), Expect = 0.43
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 43 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 156
G + +KCD++ C NG A C GL ++ ++ C
Sbjct: 342 GNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKEC 379
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.5 bits (63), Expect = 0.75
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +1
Query: 13 ISTPHCS-RLYGIFPDENKCDVFWNCWN-GEASRYQCSPGLAYDRESRVCMWADQV 174
+ T C + G + D C F+ C A ++CSPGL + C W V
Sbjct: 778 VDTTFCKDKPNGYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNV 833
>SB_58783| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.1 bits (62), Expect = 0.99
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 233 SPTLARSAVTLIPKIAVNITSVSRGGPVP 319
S L R AV PK +++I S SRGGPVP
Sbjct: 42 STRLLRKAVKN-PKSSLSIPSTSRGGPVP 69
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.1 bits (62), Expect = 0.99
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 65 SATFSGTAGTEKPPAI--SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSP 238
S++ +G TEK + S+ LPT+ +PA+ S K +T P S
Sbjct: 120 SSSSTGQTPTEKTDSTPKSSGSTLPTSSTPATQNPTDSSLSTKPPTKKTGETQSPTENSI 179
Query: 239 TLARSAVTLIPKIAVNITSVSRGGP 313
+ SA T P + + TS + P
Sbjct: 180 STEESATTPTPSGSTSPTSPNNASP 204
>SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)
Length = 653
Score = 28.7 bits (61), Expect = 1.3
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +2
Query: 32 RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDS 211
+D +S+L G GT K A + AP+ P E P I+ + K Q+ +
Sbjct: 127 QDNNSSTLKGDEVINEGDTGTFK--ANTPAPEAPQEEEPPPLPPKIKKDHYQVPKVQSST 184
Query: 212 AAQPPVRSPTLARSAVTLIPKIAV-NITSVSRGGPVPNSP 328
PP + P L S T + V N ++ SR N P
Sbjct: 185 RPTPPPKPPHLKVSRTTSADALPVRNESAHSRHMSEGNLP 224
>SB_53929| Best HMM Match : Amelogenin (HMM E-Value=3.6)
Length = 156
Score = 28.7 bits (61), Expect = 1.3
Identities = 29/108 (26%), Positives = 43/108 (39%)
Frame = +2
Query: 14 SPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTK 193
S + ++ AS ++A + TA P +AAP P T + A A + +A
Sbjct: 26 SVIRSLMSAEASLTAASAAPVTPTAAPAAPVTPTAAPAAPVTPTAAPAARVT--PTAAPA 83
Query: 194 K*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRGGPVPNSPYSE 337
T +AA +PT AR T P V T+ P P + E
Sbjct: 84 APVTPTAAPAARVTPTAARVTPTAAPAAPVTPTA----APAPAQSHEE 127
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 28.7 bits (61), Expect = 1.3
Identities = 29/108 (26%), Positives = 43/108 (39%)
Frame = +2
Query: 14 SPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTK 193
S + ++ AS ++A + TA P +AAP P T + A A + +A
Sbjct: 183 SVIRSLMSAEASLTAASAAPVTPTAAPAAPVTPTAAPAAPVTPTAAPAARVT--PTAAPA 240
Query: 194 K*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRGGPVPNSPYSE 337
T +AA +PT AR T P V T+ P P + E
Sbjct: 241 APVTPTAAPAARVTPTAARVTPTAAPAAPVTPTA----APAPAQSHEE 284
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +1
Query: 91 NGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHAHP 270
+ + Y C+PG +D CM + N CP GS ++
Sbjct: 637 SSSSCEYTCTPGQYFDTLKANCMTCPEGTYQNEVGKVNCTSCPPGLATLTTGSTNK---- 692
Query: 271 EDCRKYYICLEG 306
EDCRK IC +G
Sbjct: 693 EDCRK--ICGKG 702
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 5 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 154
+P +P + T S+ SA GT GT P+ +AP P+T S S
Sbjct: 487 TPSTPSTSSTPSTPSTPSTPSAP--GTPGTPSTPSTPSAPGTPSTPSTPS 534
>SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34)
Length = 174
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +1
Query: 109 YQCSPGLAYDRESR-VC---MWADQVPECK 186
Y+C PG D +++ VC W+ VPECK
Sbjct: 144 YRCDPGTDPDGQTQLVCNDGRWSSPVPECK 173
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 46 IFPDENKCDVFWNCWNGEASRYQCSPGLAYDRE 144
I P +N C + C G + CSPG DRE
Sbjct: 3116 IGPHKNPCPLGHFCPEGSGDKNPCSPGHYGDRE 3148
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/48 (25%), Positives = 18/48 (37%)
Frame = +1
Query: 34 RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 177
R G + C ++ C N QC GL ++ + C W P
Sbjct: 65 RANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAP 112
>SB_57471| Best HMM Match : TatC (HMM E-Value=0.27)
Length = 687
Score = 27.5 bits (58), Expect = 3.0
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +2
Query: 5 SPQSPLLTVRDCT-ASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRF-R 178
+P SP +T+ T A+S M S+T S + T A AA PT SP+S +
Sbjct: 235 APTSPNVTINRTTEANSTMILSST-SVSYNTTLTSAPDAASTAPTAISPSSVGNMTTLVS 293
Query: 179 SAKTKK*QTDSAAQPPVRSPTLA-RSAVTLIPKIAVNITS 295
S + + P +R+ L+ + V + P +TS
Sbjct: 294 SVNLTRSSLSTTLIPSIRTSILSYNTTVIVTPNTTRLVTS 333
Score = 25.8 bits (54), Expect = 9.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 SPQSPLLTV-RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGL 166
+P SP +T+ R A+S M S T S + T PPA A T SP+S +
Sbjct: 46 APTSPNVTLNRTREANSTMILSPT-SVSYNTTLPPAPDATSTATTAISPSSVANM 99
>SB_35959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 4 EPPISTPHCSRLYGI-FPDENKCDVFWNCWNGEASRYQCSPGLAYDRESR 150
E P P + ++G+ F E + + W G ASRYQC A D +R
Sbjct: 330 ELPTEPPAIASVHGLDFEAERELR---SLWRGSASRYQCPRKDARDESAR 376
>SB_10763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 44 ASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 157
+S+ +SAT + TAG P +AA DLP PA+A
Sbjct: 92 SSASSPSSATAATTAGK---PVAAAAKDLPEVRKPATA 126
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -3
Query: 234 DLTGGWAAESVCYFFVFALRNLISPHADAGLSVVGKSGAALIAGGFSVPAVP--ENVALV 61
D+ G ++ +C + + +L+ P + + GK ALI G V +P E VAL+
Sbjct: 754 DVLGVGHSQGICSLLIPGICSLLLPGEECVALIPGKECVALIPGKECVALIPGKECVALI 813
Query: 60 FIRE 49
+E
Sbjct: 814 SGKE 817
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +2
Query: 119 APDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSV 298
+PDL E P I SA T K PP+ S SA+T + +V++
Sbjct: 764 SPDLTAAEKPELLSDAISTNSAATDKKIVTDDQLPPISSNRSDTSALTSEAQHSVSLDID 823
Query: 299 SRGGPVPN 322
S P P+
Sbjct: 824 SSTYPEPS 831
>SB_16558| Best HMM Match : SoxE (HMM E-Value=8.2)
Length = 134
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 203 TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRGGPVP 319
T +A + + T A S T I +++I S SRGGPVP
Sbjct: 37 TATATATAIATAT-ATSTSTAIAISSLSIPSTSRGGPVP 74
>SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +1
Query: 88 WNGEASRYQCSPGLAYDRESRV-C----MWADQVPECKNEEV 198
W GE+ Y+C G E+++ C W+ P CK +E+
Sbjct: 356 WAGESVTYECHHGYWLREEAKIQCTENGTWSHPQPICKGQEL 397
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +1
Query: 43 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCM 159
G +PD ++CD + +C +G C G + C+
Sbjct: 178 GDYPDTSRCDGYVSCVSGYIYYMPCPAGTQWKNAEDACV 216
>SB_44336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = +2
Query: 260 TLIPKIA--VNITSVSRGGPVP 319
TL+P+ A ++I S SRGGPVP
Sbjct: 32 TLMPEFASSLSIPSTSRGGPVP 53
>SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 921
Score = 27.1 bits (57), Expect = 4.0
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 EPPISTPHCSRLYGI-FPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPE 180
E P P + ++G+ F E + + W G ASRYQC A +R A +V
Sbjct: 347 ELPTEPPAIASVHGLDFEAERELR---SLWRGSASRYQCRRKNARGEGARGAHSASRVWL 403
Query: 181 CKNEEVAN 204
C V N
Sbjct: 404 CGRVVVTN 411
>SB_23692| Best HMM Match : Ribosomal_S26e (HMM E-Value=3.3)
Length = 572
Score = 27.1 bits (57), Expect = 4.0
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 EPPISTPHCSRLYGI-FPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPE 180
E P P + ++G+ F E + + W G ASRYQC A +R A +V
Sbjct: 309 ELPTEPPAIASVHGLDFEAERELR---SLWRGSASRYQCRRKNARGEGARGAHSASRVWL 365
Query: 181 CKNEEVAN 204
C V N
Sbjct: 366 CGRVVVTN 373
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 205 GFGCPAPGEVSNAGSFS-RHAHPEDCRKYYICLEG 306
G PA E AG +A P+DC YY C +G
Sbjct: 217 GKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKG 251
>SB_15447| Best HMM Match : C1_1 (HMM E-Value=0.11)
Length = 316
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 43 GIFPDENKCDVFWNCWNGEASR 108
G F E++C+ NCW G + R
Sbjct: 257 GYFSCEDRCERLRNCWEGRSVR 278
>SB_12922| Best HMM Match : MFS_1 (HMM E-Value=1.1)
Length = 473
Score = 26.6 bits (56), Expect = 5.3
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 5 SPQSPLLTV-RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 154
+P SP +T+ R A+S M S+T S + T PA A PT SP+S
Sbjct: 235 APTSPNVTINRTREANSTMILSST-SVSYNTTLTPAPDATSTAPTAISPSS 284
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 5 SPQSPLLTV-RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 154
+P SP +T+ R A S M S+T S + T PA A PT SP+S
Sbjct: 46 APTSPNVTINRTREAKSTMILSST-SVSYNTTLTPAPDVASTAPTAISPSS 95
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 5 SPQSPLLTV-RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 154
+P SP +T+ R A S M S+T S + T PA A PT SP+S
Sbjct: 424 APTSPNVTINRTREAKSTMILSST-SVSYNTTLTPAPDVASTAPTAISPSS 473
>SB_51347| Best HMM Match : CBM_14 (HMM E-Value=4.5e-08)
Length = 60
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 22 PHCSRLYGIFPD-ENKCDVFWNCWNG-EASRYQCSPGLAYDRESRVCMWADQ 171
P C+ +F D + C V+ C R C+PG + ++ +C+ +Q
Sbjct: 2 PPCTHEGEMFADTQGNCSVYVQCDAALNPIRRPCAPGTEWRQQDHICVHPEQ 53
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 52 PDENKCDVFWNCWNGEASRYQCSPG 126
PD KC + C NG A+ QC G
Sbjct: 2087 PDGAKCQPGYYCPNGSANPIQCDRG 2111
>SB_7051| Best HMM Match : RVT_1 (HMM E-Value=0.064)
Length = 756
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 13 ISTPHCSRLYGIFPDENKCDVFWNCWNGEASRY 111
I+T CS L+G + K DVF+N R+
Sbjct: 262 ITTHDCSNLFGAHTCQAKFDVFYNTITDALDRF 294
>SB_3701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 183 QKRRSSKRIRLPSPR*GLQRWLVQPSRSSRRLP*ILHLSRGGARYPIRP 329
Q SS R++ PS + QPS+++ + +SRG R P P
Sbjct: 152 QATESSNRVKQPSQATESSNRVKQPSQATESSNRVKLISRGSIRRPYSP 200
>SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 190 EEVANGFGCPAPGEVSNAGSFSRHAHP 270
E ++G G PG +AG + R HP
Sbjct: 23 ETPSDGHGSARPGTTESAGRYDRGTHP 49
>SB_1435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 179 SAKTKK*QTDSAAQPPVRSPTLARSAVTLI 268
SAK Q DS PP SPT A VT++
Sbjct: 29 SAKLACLQVDSRGSPPPFSPTAAPYPVTIV 58
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 22.2 bits (45), Expect(2) = 8.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 14 SPLLTVR-DCTASSLMKTSATFSGTAGTEKPPAISAAPD---LP-TTESPAS 154
+P TV + TA++ +A + T P SAAPD +P TT +PA+
Sbjct: 2921 APETTVAAETTAAAETTAAAETTAAPETTAAPETSAAPDTTMVPQTTSAPAT 2972
Score = 21.8 bits (44), Expect(2) = 8.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 200 QTDSAAQPPVRSPTLARSAVTLIPK 274
+T +AAQ V + T A T++P+
Sbjct: 3007 ETTAAAQTTVAAETTAAPETTIVPE 3031
>SB_35277| Best HMM Match : WIF (HMM E-Value=9.8e-06)
Length = 587
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +2
Query: 221 PPVRSPTLARSAVTLIPKIAVNITSVSRGGPVPNSP 328
PP+ + L+ ++ ++ N+T+++RG V ++P
Sbjct: 427 PPIPNTNLSNGDISRTMSMSSNVTALNRGTSVSSAP 462
>SB_53060| Best HMM Match : ResIII (HMM E-Value=0.14)
Length = 1248
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 4 EPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC 117
E P P + ++G+ + + + W G ASRYQC
Sbjct: 348 ELPTEPPAIASVHGLDSEAER--ELRSLWRGSASRYQC 383
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Frame = +2
Query: 203 TDSAAQPPVRSPTLARSAVT-------LIPKIAVNITSVSRGGPVPNS 325
T+ A+PP R P A+ AV +P +A + R G PNS
Sbjct: 586 TEGPARPPARPPPTAKPAVNRLSPTRRSLPPVATHQEDRYRPGSTPNS 633
>SB_25197| Best HMM Match : TatC (HMM E-Value=1.8)
Length = 622
Score = 25.8 bits (54), Expect = 9.2
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +2
Query: 5 SPQSPLLTV-RDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRF-R 178
+P P +T+ R A S M S+T S + T PA AA PT SP+S +
Sbjct: 316 APTLPNVTINRTREAKSPMILSST-SVSYNTTLTPAPDAASTAPTAISPSSVGNMTTLVS 374
Query: 179 SAKTKK*QTDSAAQPPVRSPTLARSAVTLI-PKIAVNITS 295
S + + P +R+ L+ + ++ P +TS
Sbjct: 375 SVNLTRSSLSTTLIPSIRTSILSYNRTVIVTPNTTRLVTS 414
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 17 PLLTVRDCTASSLMKTSAT-FSGTAGTEKPPAISAAP 124
P+ T D T + T+ T SGT ++K AIS P
Sbjct: 192 PITTPNDPTVIQTISTTLTNLSGTTASDKSTAISTHP 228
>SB_4058| Best HMM Match : PSP1 (HMM E-Value=0.79)
Length = 224
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +1
Query: 76 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFS 255
F+ W +S + S +DR +R+CM V + K+ G V +A F
Sbjct: 6 FFRSWAARSSWFPTSQQARFDRLARICMGDRTVEKNKSAPWCEDGGVAESKAVFHAEKFR 65
Query: 256 RHAHP 270
P
Sbjct: 66 ESLAP 70
>SB_870| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09)
Length = 334
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = +2
Query: 260 TLIPKIAVN---ITSVSRGGPVP 319
T+IP + ++ I S SRGGPVP
Sbjct: 202 TVIPMVTISSLSIPSTSRGGPVP 224
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,292,378
Number of Sequences: 59808
Number of extensions: 264423
Number of successful extensions: 1083
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 498218920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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