Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2178
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   2.0  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      25   3.5  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    25   3.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.5  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    24   4.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   6.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   6.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   6.0  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   6.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   6.0  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 559 QQRYRNSVLRRFRVFEQAAQTHRS-VPAQSDVLQCGQYHVLHDHGKLCRVQ 708
           QQ+    +L+R     + +Q  R    +++D     QYH  +D  K CR+Q
Sbjct: 289 QQQMMKPMLQRHLTRNKRSQPARKRKSSKTDHRHPFQYHPTYDQHKSCRIQ 339


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 356 SPTEIARRPTTCPFEPASFAVCTCSRQTWFRAF*TTNDT 240
           SP   A RP   PF+ AS  +   SR    +    TN T
Sbjct: 31  SPNSPAERPHIQPFQMASAPLVAQSRSAMVQTLTCTNPT 69


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 573 SVPLLMYCCGCSICIFSP 520
           S  LL+  CGC++ + SP
Sbjct: 3   SAVLLLLVCGCALAVLSP 20


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 16/62 (25%), Positives = 28/62 (45%)
 Frame = +2

Query: 482 DKRTTLEELLIERGEKIQMLQPQQYINSGTEIPFCDDSEFLNRLLKHIDPYPLSRMYYNA 661
           D +   ++L I+   KI  L   ++   G +    DD E+L  +   I P P S++   A
Sbjct: 771 DVKIVHQKLDIKAESKIGSLDNLKHKPGGGDKKIFDDKEYLKNIEHPITPSPSSQVKSGA 830

Query: 662 AN 667
            +
Sbjct: 831 GS 832


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +2

Query: 296 PQMTQVQTDTLLDAVRSLLEMPSTTVDLTTVDIMRSS 406
           P  ++   DTL + V  + ++PS  + L+++D++  S
Sbjct: 282 PDGSKPGADTLPNIVNFIAQLPSDELRLSSIDLLLQS 318


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 7/12 (58%), Positives = 12/12 (100%)
 Frame = +2

Query: 14  APSSAQPTPRPV 49
           AP++A+PTP+P+
Sbjct: 411 APATAKPTPKPI 422


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 7/12 (58%), Positives = 12/12 (100%)
 Frame = +2

Query: 14  APSSAQPTPRPV 49
           AP++A+PTP+P+
Sbjct: 411 APATAKPTPKPI 422


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 508 VDRARREDTNAAAATIHQQRYRNSVLRRFRVFE 606
           VD+      N    T  + R +  VL+RFR+ E
Sbjct: 579 VDKVATNPQNCLKQTTIEHRKQEEVLKRFRMHE 611


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 539 LQPQQYINSGTEIPFCDDSEFLNR 610
           +Q Q+Y+N+   I +CD   FLNR
Sbjct: 668 VQHQEYLNTTALISYCD---FLNR 688


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 539 LQPQQYINSGTEIPFCDDSEFLNR 610
           +Q Q+Y+N+   I +CD   FLNR
Sbjct: 668 VQHQEYLNTTALISYCD---FLNR 688


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,035
Number of Sequences: 2352
Number of extensions: 16844
Number of successful extensions: 45
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)