Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2178
         (778 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065604-1|BAC05832.1|  359|Homo sapiens seven transmembrane hel...    32   2.6  
D43949-1|BAA07893.2|  882|Homo sapiens KIAA0082 protein.               31   4.6  
BC031890-1|AAH31890.1|  835|Homo sapiens KIAA0082 protein.             31   4.6  
AL353597-2|CAI19603.1|  835|Homo sapiens KIAA0082 protein.             31   4.6  

>AB065604-1|BAC05832.1|  359|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 359

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +2

Query: 143 KLIHHYSLNSTSSTEYKISDVVMTMIFLLRSEKYHSLFKMLETTFDDYT 289
           K+IHHYS    S      SD+  ++I LL S   H L   L   F  YT
Sbjct: 172 KIIHHYSYEMPSLLPLSCSDISRSLIVLLCSTLLHGLGNFL-LVFLSYT 219


>D43949-1|BAA07893.2|  882|Homo sapiens KIAA0082 protein.
          Length = 882

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -2

Query: 576 ISVPLLMYCCGCSICIFSPRSIN--NSSRVVRLSRCEATFCNSTIFAYFIIGLLKQRAND 403
           + +  L+YCC   +C+F P +    NS R V     +    +   + + +   L Q  N 
Sbjct: 461 VGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQLRNT 520

Query: 402 DRIISTVVKSTVVEG 358
           D  ++ VV   V++G
Sbjct: 521 DSDVNLVVPLEVIKG 535


>BC031890-1|AAH31890.1|  835|Homo sapiens KIAA0082 protein.
          Length = 835

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -2

Query: 576 ISVPLLMYCCGCSICIFSPRSIN--NSSRVVRLSRCEATFCNSTIFAYFIIGLLKQRAND 403
           + +  L+YCC   +C+F P +    NS R V     +    +   + + +   L Q  N 
Sbjct: 414 VGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQLRNT 473

Query: 402 DRIISTVVKSTVVEG 358
           D  ++ VV   V++G
Sbjct: 474 DSDVNLVVPLEVIKG 488


>AL353597-2|CAI19603.1|  835|Homo sapiens KIAA0082 protein.
          Length = 835

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -2

Query: 576 ISVPLLMYCCGCSICIFSPRSIN--NSSRVVRLSRCEATFCNSTIFAYFIIGLLKQRAND 403
           + +  L+YCC   +C+F P +    NS R V     +    +   + + +   L Q  N 
Sbjct: 414 VGLVYLLYCCFERVCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQLRNT 473

Query: 402 DRIISTVVKSTVVEG 358
           D  ++ VV   V++G
Sbjct: 474 DSDVNLVVPLEVIKG 488


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,035,822
Number of Sequences: 237096
Number of extensions: 2057123
Number of successful extensions: 9111
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9111
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)