Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2177
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   0.89 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.3  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 617 KNKNSTKLVLRRYFVVVNFDVRNLSFSGFIR 525
           K KN+ KL +RR F++ N +     +  FI+
Sbjct: 345 KRKNNIKLYVRRVFIMDNCEELIPEYLNFIK 375


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 620 IKNKNSTKLVLRRYFVV 570
           + NKN+T LVL +Y +V
Sbjct: 22  LSNKNNTYLVLNKYLLV 38


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 339 IKKVFYSDDERKSIIILYRFNQFCFHLQIYFFVLNR*TEKGFDN 208
           I+ + Y ++  +  I+L   N F       FF LNR T  G  N
Sbjct: 462 IQMLVYQNEAEEVKILLDVINHFPHFTAARFFDLNRKTILGVLN 505


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,360
Number of Sequences: 336
Number of extensions: 2511
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)