Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2175
(705 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 24 1.0
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 24 1.4
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 24 1.4
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 24 1.4
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 1.8
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 4.2
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 4.2
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 22 4.2
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 22 5.6
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 22 5.6
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 21 7.4
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 9.8
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 38 AWSLLDASRDVPNNCGFSG 94
A SL++++R+VP C F+G
Sbjct: 735 ATSLVESNRNVPQKCIFNG 753
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 394 LAPTSLPTPTSQVALLEPLPTRHPSC 471
+ P PT +S AL P P SC
Sbjct: 214 IPPAEFPTTSSSSALESPNPASRSSC 239
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 394 LAPTSLPTPTSQVALLEPLPTRHPSC 471
+ P PT +S AL P P SC
Sbjct: 3 IPPAEFPTTSSSSALESPNPASRSSC 28
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 394 LAPTSLPTPTSQVALLEPLPTRHPSC 471
+ P PT +S AL P P SC
Sbjct: 3 IPPAEFPTTSSSSALESPNPASRSSC 28
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 394 LAPTSLPTPTSQVALLEPLPTRHPSC 471
+ P PT +S AL P P SC
Sbjct: 214 IPPAEFPTTSSSSALESPDPASRSSC 239
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.2
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +1
Query: 412 PTPTSQVALLEPLPTRHPSCRP--CRSHRLHH--FPSQLI*SRRGLPP 543
PTPTS + L P P S P +H + H +PS I L P
Sbjct: 313 PTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSIYPSSNLMP 360
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.2 bits (45), Expect = 4.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 315 LISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGP 437
LI QP+ S + PQWP ++ + +P T +GP
Sbjct: 64 LIPQPLHPSVP--RLGHPQWPFAWGSLXRSSSPQTSAPTGP 102
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 22.2 bits (45), Expect = 4.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 93 PEKPQLLGTSREASRRLQAQQPRQLIKHT 7
PEK G + S QA QP I+H+
Sbjct: 117 PEKGGGAGAAASGSAAAQAGQPDNAIEHS 145
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3
Query: 615 SYNLHGAPLVTSYTTPLVYSAP 680
S + GAP++ S PL+Y P
Sbjct: 143 SLQVPGAPMMMSSHGPLMYGQP 164
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/34 (26%), Positives = 23/34 (67%)
Frame = +2
Query: 512 SSSDQEEVCPRAGDNLHRTYYLHRCSPRSFLSSV 613
S+S +++ + GD+ H+T++L + +P + L ++
Sbjct: 258 SNSSEKKSSIQHGDDAHKTHHLDK-NPENTLGTM 290
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 251 SNHLPR*NSSPGFDLLRFFDSFNLATYCVF 340
S HLP+ +++ FD+ R L T C F
Sbjct: 314 SQHLPKFSAANFFDIERSTILSVLGTACTF 343
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 308 DSFNLATYCVFCSFYQEALST 370
DSF L + +CS Q LST
Sbjct: 225 DSFTLEQHRSWCSSSQPVLST 245
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,370
Number of Sequences: 336
Number of extensions: 3111
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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