Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2169
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 153 5e-37
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 153 5e-37
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 153 5e-37
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 153 5e-37
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 153 5e-37
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 88 3e-17
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 88 3e-17
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 88 3e-17
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 88 3e-17
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 88 3e-17
AL049712-3|CAI22416.1| 218|Homo sapiens nucleolar protein 5A (5... 88 3e-17
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 47 6e-05
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 47 6e-05
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 47 6e-05
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 47 6e-05
U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein. 32 1.8
U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein. 32 1.8
M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein. 32 1.8
AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I p... 32 1.8
AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I p... 32 1.8
J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein. 32 2.4
BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein. 31 4.2
BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein. 30 9.8
BC032844-1|AAH32844.1| 714|Homo sapiens angiogenic factor with ... 30 9.8
AY500996-1|AAR97617.1| 714|Homo sapiens angiogenic factor VG5Q ... 30 9.8
AY500994-1|AAR97615.1| 714|Homo sapiens angiogenic factor VG5Q ... 30 9.8
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 153 bits (372), Expect = 5e-37
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALK+++DTPKYGLIYHA LVGQ S K+KGK+SRMLAAK LA R DA
Sbjct: 315 TVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDA 374
Query: 464 FGEDVSFELGAEHKVKXXXXXXXXXXXXXXRISGTGKAKIKFEKYHSKSEVYQYPDASDN 285
FGED S +G E++ K +ISGTGKA K EKY KSEV Y + D+
Sbjct: 375 FGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHKSEVKTYDPSGDS 434
Query: 284 TID--KKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENEEPAED 144
T+ K K E ED+++ KK K +K+ +K + E E+ AE+
Sbjct: 435 TLPTCSKKRKIEQVDKEDEITEKKAK----KAKIKVKVEEEEEEKVAEE 479
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSKTSCFLQYRFLVQKKLFSVP*KRRKT 584
+GE +GARLIAHAGS +K + +K LF RR T
Sbjct: 290 VGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDT 335
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 153 bits (372), Expect = 5e-37
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALK+++DTPKYGLIYHA LVGQ S K+KGK+SRMLAAK LA R DA
Sbjct: 315 TVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDA 374
Query: 464 FGEDVSFELGAEHKVKXXXXXXXXXXXXXXRISGTGKAKIKFEKYHSKSEVYQYPDASDN 285
FGED S +G E++ K +ISGTGKA K EKY KSEV Y + D+
Sbjct: 375 FGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHKSEVKTYDPSGDS 434
Query: 284 TID--KKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENEEPAED 144
T+ K K E ED+++ KK K +K+ +K + E E+ AE+
Sbjct: 435 TLPTCSKKRKIEQVDKEDEITEKKAK----KAKIKVKVEEEEEEKVAEE 479
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSKTSCFLQYRFLVQKKLFSVP*KRRKT 584
+GE +GARLIAHAGS +K + +K LF RR T
Sbjct: 290 VGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDT 335
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 153 bits (372), Expect = 5e-37
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALK+++DTPKYGLIYHA LVGQ S K+KGK+SRMLAAK LA R DA
Sbjct: 315 TVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDA 374
Query: 464 FGEDVSFELGAEHKVKXXXXXXXXXXXXXXRISGTGKAKIKFEKYHSKSEVYQYPDASDN 285
FGED S +G E++ K +ISGTGKA K EKY KSEV Y + D+
Sbjct: 375 FGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHKSEVKTYDPSGDS 434
Query: 284 TID--KKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENEEPAED 144
T+ K K E ED+++ KK K +K+ +K + E E+ AE+
Sbjct: 435 TLPTCSKKRKIEQVDKEDEITEKKAK----KAKIKVKVEEEEEEKVAEE 479
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSKTSCFLQYRFLVQKKLFSVP*KRRKT 584
+GE +GARLIAHAGS +K + +K LF RR T
Sbjct: 290 VGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDT 335
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 153 bits (372), Expect = 5e-37
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALK+++DTPKYGLIYHA LVGQ S K+KGK+SRMLAAK LA R DA
Sbjct: 315 TVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDA 374
Query: 464 FGEDVSFELGAEHKVKXXXXXXXXXXXXXXRISGTGKAKIKFEKYHSKSEVYQYPDASDN 285
FGED S +G E++ K +ISGTGKA K EKY KSEV Y + D+
Sbjct: 375 FGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHKSEVKTYDPSGDS 434
Query: 284 TID--KKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENEEPAED 144
T+ K K E ED+++ KK K +K+ +K + E E+ AE+
Sbjct: 435 TLPTCSKKRKIEQVDKEDEITEKKAK----KAKIKVKVEEEEEEKVAEE 479
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSKTSCFLQYRFLVQKKLFSVP*KRRKT 584
+GE +GARLIAHAGS +K + +K LF RR T
Sbjct: 290 VGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDT 335
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 153 bits (372), Expect = 5e-37
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALK+++DTPKYGLIYHA LVGQ S K+KGK+SRMLAAK LA R DA
Sbjct: 315 TVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDA 374
Query: 464 FGEDVSFELGAEHKVKXXXXXXXXXXXXXXRISGTGKAKIKFEKYHSKSEVYQYPDASDN 285
FGED S +G E++ K +ISGTGKA K EKY KSEV Y + D+
Sbjct: 375 FGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKALAKTEKYEHKSEVKTYDPSGDS 434
Query: 284 TID--KKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENEEPAED 144
T+ K K E ED+++ KK K +K+ +K + E E+ AE+
Sbjct: 435 TLPTCSKKRKIEQVDKEDEITEKKAK----KAKIKVKVEEEEEEKVAEE 479
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSKTSCFLQYRFLVQKKLFSVP*KRRKT 584
+GE +GARLIAHAGS +K + +K LF RR T
Sbjct: 290 VGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDT 335
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 87.8 bits (208), Expect = 3e-17
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALKT+ +TPKYGLI+H+ +G+ + KNKG++SR LA K ++A+R+D
Sbjct: 331 TVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDC 390
Query: 464 FGE 456
F E
Sbjct: 391 FSE 393
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSK 659
IGE +GARLIAHAGS +K
Sbjct: 306 IGEAVGARLIAHAGSLTNLAK 326
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 87.8 bits (208), Expect = 3e-17
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALKT+ +TPKYGLI+H+ +G+ + KNKG++SR LA K ++A+R+D
Sbjct: 325 TVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDC 384
Query: 464 FGE 456
F E
Sbjct: 385 FSE 387
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSK 659
IGE +GARLIAHAGS +K
Sbjct: 300 IGEAVGARLIAHAGSLTNLAK 320
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 87.8 bits (208), Expect = 3e-17
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALKT+ +TPKYGLI+H+ +G+ + KNKG++SR LA K ++A+R+D
Sbjct: 325 TVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDC 384
Query: 464 FGE 456
F E
Sbjct: 385 FSE 387
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSK 659
IGE +GARLIAHAGS +K
Sbjct: 300 IGEAVGARLIAHAGSLTNLAK 320
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 87.8 bits (208), Expect = 3e-17
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALKT+ +TPKYGLI+H+ +G+ + KNKG++SR LA K ++A+R+D
Sbjct: 321 TVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDC 380
Query: 464 FGE 456
F E
Sbjct: 381 FSE 383
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSK 659
IGE +GARLIAHAGS +K
Sbjct: 296 IGEAVGARLIAHAGSLTNLAK 316
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 87.8 bits (208), Expect = 3e-17
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALKT+ +TPKYGLI+H+ +G+ + KNKG++SR LA K ++A+R+D
Sbjct: 325 TVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDC 384
Query: 464 FGE 456
F E
Sbjct: 385 FSE 387
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSK 659
IGE +GARLIAHAGS +K
Sbjct: 300 IGEAVGARLIAHAGSLTNLAK 320
>AL049712-3|CAI22416.1| 218|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 218
Score = 87.8 bits (208), Expect = 3e-17
Identities = 37/63 (58%), Positives = 52/63 (82%)
Frame = -3
Query: 644 TIQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDA 465
T+QI GA+KALFRALKT+ +TPKYGLI+H+ +G+ + KNKG++SR LA K ++A+R+D
Sbjct: 65 TVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDC 124
Query: 464 FGE 456
F E
Sbjct: 125 FSE 127
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -1
Query: 721 IGEHIGARLIAHAGSPNEFSK 659
IGE +GARLIAHAGS +K
Sbjct: 40 IGEAVGARLIAHAGSLTNLAK 60
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 47.2 bits (107), Expect = 6e-05
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -3
Query: 641 IQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDAF 462
I + GA++ + P G IYH+ +V + K +R++AAK LA RVD+F
Sbjct: 249 IMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSF 308
Query: 461 GEDVSFELGAEHK 423
E ++G E K
Sbjct: 309 HESTEGKVGYELK 321
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 47.2 bits (107), Expect = 6e-05
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -3
Query: 641 IQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDAF 462
I + GA++ + P G IYH+ +V + K +R++AAK LA RVD+F
Sbjct: 249 IMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSF 308
Query: 461 GEDVSFELGAEHK 423
E ++G E K
Sbjct: 309 HESTEGKVGYELK 321
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 47.2 bits (107), Expect = 6e-05
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -3
Query: 641 IQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDAF 462
I + GA++ + P G IYH+ +V + K +R++AAK LA RVD+F
Sbjct: 249 IMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSF 308
Query: 461 GEDVSFELGAEHK 423
E ++G E K
Sbjct: 309 HESTEGKVGYELK 321
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 47.2 bits (107), Expect = 6e-05
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = -3
Query: 641 IQIFGAKKALFRALKTKKDTPKYGLIYHAQLVGQCSTKNKGKMSRMLAAKAALATRVDAF 462
I + GA++ + P G IYH+ +V + K +R++AAK LA RVD+F
Sbjct: 169 IMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSF 228
Query: 461 GEDVSFELGAEHK 423
E ++G E K
Sbjct: 229 HESTEGKVGYELK 241
>U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 90 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIK 149
Query: 212 LENDVSKVSLKNIKTENE 159
E D K + ++ E +
Sbjct: 150 TE-DTKKEKKRKLEEEED 166
>U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 90 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIK 149
Query: 212 LENDVSKVSLKNIKTENE 159
E D K + ++ E +
Sbjct: 150 TE-DTKKEKKRKLEEEED 166
>M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein.
Length = 765
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 94 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIK 153
Query: 212 LENDVSKVSLKNIKTENE 159
E D K + ++ E +
Sbjct: 154 TE-DTKKEKKRKLEEEED 170
>AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 94 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIK 153
Query: 212 LENDVSKVSLKNIKTENE 159
E D K + ++ E +
Sbjct: 154 TE-DTKKEKKRKLEEEED 170
>AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 32.3 bits (70), Expect = 1.8
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 94 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIK 153
Query: 212 LENDVSKVSLKNIKTENE 159
E D K + ++ E +
Sbjct: 154 TE-DTKKEKKRKLEEEED 170
>J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein.
Length = 765
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 94 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDVDYKPKKIK 153
Query: 212 LENDVSKVSLKNIKTENE 159
E D K + ++ E +
Sbjct: 154 TE-DTKKEKKRKLEEEED 170
>BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein.
Length = 164
Score = 31.1 bits (67), Expect = 4.2
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 94 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIK 153
Query: 212 LENDVSKVSLK 180
E+ K K
Sbjct: 154 TEDTKKKKKKK 164
>BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein.
Length = 165
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Frame = -3
Query: 371 ISGTGKAKIKFEKYHSKSEVYQYPDASDNT-------IDKKPIKREHSPDEDQVSAKKIK 213
+ +G AKIK EK + S Q D ++ D KP+KR D+ KKIK
Sbjct: 94 VRASGDAKIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIK 153
Query: 212 LEN 204
E+
Sbjct: 154 TED 156
>BC032844-1|AAH32844.1| 714|Homo sapiens angiogenic factor with G
patch and FHA domains 1 protein.
Length = 714
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 335 KYHSKSEVYQYPDAS-DNTIDKKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENE 159
++HS+ ++ YP +S + DKK K+ PD + +K D S+++ E
Sbjct: 251 QFHSRVDLQPYPTSSTKQSKDKKLKKKRKDPDSSATNEEKDLNSEDQKAFSVEHTSCNEE 310
Query: 158 E 156
E
Sbjct: 311 E 311
>AY500996-1|AAR97617.1| 714|Homo sapiens angiogenic factor VG5Q
protein.
Length = 714
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 335 KYHSKSEVYQYPDAS-DNTIDKKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENE 159
++HS+ ++ YP +S + DKK K+ PD + +K D S+++ E
Sbjct: 251 QFHSRVDLQPYPTSSTKQSKDKKLKKKRKDPDSSATNEEKDLNSEDQKAFSVEHTSCNEE 310
Query: 158 E 156
E
Sbjct: 311 E 311
>AY500994-1|AAR97615.1| 714|Homo sapiens angiogenic factor VG5Q
protein.
Length = 714
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3
Query: 335 KYHSKSEVYQYPDAS-DNTIDKKPIKREHSPDEDQVSAKKIKLENDVSKVSLKNIKTENE 159
++HS+ ++ YP +S + DKK K+ PD + +K D S+++ E
Sbjct: 251 QFHSRVDLQPYPTSSTKQSKDKKLKKKRKDPDSSATNEEKDLNSEDQKAFSVEHTSCNEE 310
Query: 158 E 156
E
Sbjct: 311 E 311
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,817,492
Number of Sequences: 237096
Number of extensions: 1569548
Number of successful extensions: 4228
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4219
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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