Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2165
(733 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical pr... 316 1e-86
U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical pr... 316 1e-86
AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical ... 36 0.039
Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF068717-4|AAC17764.2| 357|Caenorhabditis elegans Serpentine re... 29 4.5
Z83220-3|CAB05702.1| 493|Caenorhabditis elegans Hypothetical pr... 28 5.9
U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical p... 28 7.8
>U64844-2|AAO25987.1| 846|Caenorhabditis elegans Hypothetical
protein T22F3.3b protein.
Length = 846
Score = 316 bits (775), Expect = 1e-86
Identities = 143/204 (70%), Positives = 164/204 (80%)
Frame = +2
Query: 83 VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 262
+ D ++RKQISVRGI VENV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 2 ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 61
Query: 263 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQGTVDEALYQXXXXXXXX 442
LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ TVDEALYQ
Sbjct: 62 LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQATVDEALYQLGLDIEEL 121
Query: 443 XXXXXXXXXXXXXXXRLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIENGEQQEEPDDW 622
RLAACFLDSMATLG+ AYGYG+RYEYGIF Q I +G Q EEPDDW
Sbjct: 122 QEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGYGLRYEYGIFKQLIRDGWQIEEPDDW 181
Query: 623 LRFGNPWEKARPEFMLPVNFYGSV 694
LRFGNPWEKARPE+MLPVNFYG V
Sbjct: 182 LRFGNPWEKARPEYMLPVNFYGKV 205
>U64844-1|AAK72092.1| 882|Caenorhabditis elegans Hypothetical
protein T22F3.3a protein.
Length = 882
Score = 316 bits (775), Expect = 1e-86
Identities = 143/204 (70%), Positives = 164/204 (80%)
Frame = +2
Query: 83 VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 262
+ D ++RKQISVRGI VENV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 38 ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 97
Query: 263 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQGTVDEALYQXXXXXXXX 442
LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ TVDEALYQ
Sbjct: 98 LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQATVDEALYQLGLDIEEL 157
Query: 443 XXXXXXXXXXXXXXXRLAACFLDSMATLGLAAYGYGIRYEYGIFAQKIENGEQQEEPDDW 622
RLAACFLDSMATLG+ AYGYG+RYEYGIF Q I +G Q EEPDDW
Sbjct: 158 QEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGYGLRYEYGIFKQLIRDGWQIEEPDDW 217
Query: 623 LRFGNPWEKARPEFMLPVNFYGSV 694
LRFGNPWEKARPE+MLPVNFYG V
Sbjct: 218 LRFGNPWEKARPEYMLPVNFYGKV 241
>AF067617-4|AAC17557.1| 381|Caenorhabditis elegans Hypothetical
protein T04D1.2 protein.
Length = 381
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +2
Query: 98 EKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRW 277
E K SVR +V +EN+++ ++ ++ T V R + TP Y+ + +KD+ +
Sbjct: 96 EHLKTYSVRQLVVIENISDYQEFYDMMWSQTTVSYRFLTTPPVTYW-IRSVIKDYPNMKL 154
Query: 278 IRTQQYYYENDPKRVYYLSLEY 343
YEN + +YL++ Y
Sbjct: 155 NGISYMSYENKKELEHYLNVLY 176
>Z73102-3|CAA97409.1| 337|Caenorhabditis elegans Hypothetical
protein B0035.2 protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/87 (21%), Positives = 37/87 (42%)
Frame = +2
Query: 140 ENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRWIRTQQYYYENDPKR 319
+ + + +A R H VK++ + F + T + L +T YY + P +
Sbjct: 51 QKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPDQ 110
Query: 320 VYYLSLEYYMGRSLQNTMINLGIQGTV 400
+Y +YY R+ + + I GT+
Sbjct: 111 RFYNYYQYYRLRAAPKVDLRIVIVGTI 137
>AF068717-4|AAC17764.2| 357|Caenorhabditis elegans Serpentine
receptor, class w protein144 protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 733 CVSIHFFPSGVSTYTTIEVNWQHELRSCLLPGV 635
C+++ FFP ++TY ++ Q+ SC GV
Sbjct: 166 CINLIFFPISIATYLGSDITSQNHTSSCDPDGV 198
>Z83220-3|CAB05702.1| 493|Caenorhabditis elegans Hypothetical
protein C34B7.3 protein.
Length = 493
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -3
Query: 614 QALPVVLRFQFFEQIYHIRTLYHIHTQQDLMSP*SLGNKLLSVQDLHFPDQHLPQVLLIL 435
+ + +VLRF F + + T IH + D ++G + V D +HLP L
Sbjct: 304 ETIIIVLRFAFLYLVNNPETQKRIHEELDR----NVGRERQVVMD---DQKHLPYTCAFL 356
Query: 434 QYPDQVGIMLRQQYLGC 384
Q ++G +L +L C
Sbjct: 357 QEVYRLGYVLPVNFLRC 373
>U00032-12|AAA50629.1| 482|Caenorhabditis elegans Hypothetical
protein F37A4.1 protein.
Length = 482
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 92 DAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRD-YYFALAH 247
D +++ G+ E T+ K+ F+ HY + D N TP D YF + H
Sbjct: 425 DMTPTERLMHSGVSLREESTQRKRLFDACNHYLIDFDANHVTPLDPQYFNIPH 477
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,543,801
Number of Sequences: 27780
Number of extensions: 352196
Number of successful extensions: 931
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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