Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2161
(630 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 55 1e-06
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 55 2e-06
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 54 3e-06
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 54 4e-06
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 42 0.012
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 39 0.086
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.35
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 34 2.4
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 33 5.7
UniRef50_A2EXX2 Cluster: Surface antigen BspA-like; n=1; Trichom... 33 5.7
UniRef50_Q0G4I9 Cluster: Flp pilus assembly protein TadG; n=1; F... 33 7.5
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 33 7.5
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +1
Query: 490 YPIRPIVSRITIHWPVGLQRRDWGKPWRSQLNRLAAHPLFASWRNTE 630
YP+ +S V LQRRDW P +QLNRLAAHP FASWRN+E
Sbjct: 55 YPLVKALSESYYGLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE 101
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 508 VSRITIHWPVGLQRRDWGKPWRSQLNRLAAHPLFASWRNTE 630
++ IT V LQRRDW P +QLNRLAAHP FASWRN+E
Sbjct: 1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE 41
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +1
Query: 493 PIRPIVSRITIHWPVGLQRRDWGKPWRSQLNRLAAHPLFASWRNTE 630
P+ ++ V LQRRDW P +QLNRLAAHP FASWRN+E
Sbjct: 14 PLESTCRHASLALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE 59
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 535 VGLQRRDWGKPWRSQLNRLAAHPLFASWRNTE 630
V LQRRDW P +QLNRLAAHP FASWRN+E
Sbjct: 24 VVLQRRDWENPGVTQLNRLAAHPPFASWRNSE 55
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 533 PSVYNVVTGENPGVPNLIALQHIPFSPAGVI 625
PS YNVVTG+ +PNLIALQHIP SPAGVI
Sbjct: 7 PSFYNVVTGKTLALPNLIALQHIPLSPAGVI 37
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 41.9 bits (94), Expect = 0.012
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 514 RITIHWPVGLQRRDWGKPWRSQLNRLAAHPLFASWRNTE 630
++ + P L RRDW P +Q +RL AHP F SWR+ E
Sbjct: 10 QVQLSLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVE 48
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 39.1 bits (87), Expect = 0.086
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 541 LQRRDWGKPWRSQLNRLAAHPLFASWRN 624
L R DW + LNRL AHP+FASWR+
Sbjct: 18 LAREDWHNQTITHLNRLPAHPVFASWRD 45
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.35
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 475 RGGARYPIRPIVSRIT 522
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1148
Score = 34.3 bits (75), Expect = 2.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 534 GPVNCNTTHYRANWVPGPPSRS 469
GPV N +R W+PGPP+RS
Sbjct: 618 GPVTDNPPDFRKEWIPGPPTRS 639
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3
Query: 517 YDSL*GELGTGPPLE 473
YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292
>UniRef50_A2EXX2 Cluster: Surface antigen BspA-like; n=1;
Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
- Trichomonas vaginalis G3
Length = 570
Score = 33.1 bits (72), Expect = 5.7
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 260 LAL*NSQFASSASLQVIRSLFRCE*FRLLTDCVPSLQRFYGRDEIPRIVENISHKSSIVC 439
L L S+ S + +Q + ++ C +++ DCV F E+P +E+I KS C
Sbjct: 255 LRLIGSRAFSGSRIQFL-NVSHCLNLKMIDDCVFEYCNFLKYVELPPSIESIKQKSFFNC 313
Query: 440 FRYLTI 457
R LTI
Sbjct: 314 TRLLTI 319
>UniRef50_Q0G4I9 Cluster: Flp pilus assembly protein TadG; n=1;
Fulvimarina pelagi HTCC2506|Rep: Flp pilus assembly
protein TadG - Fulvimarina pelagi HTCC2506
Length = 461
Score = 32.7 bits (71), Expect = 7.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 528 VNCNTTHYRANWVPGPPSRSTTPSIVR*RKHTILDLCEIFS 406
VN T H +W+ PPS STTPS R T C ++
Sbjct: 172 VNVGTQHRNQSWLDVPPSYSTTPSERRCETRTTRTQCTSYA 212
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 32.7 bits (71), Expect = 7.5
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +1
Query: 478 GGARYPIRPIVSRITIHWPVGLQRRDWGKPWRSQLNRLAAHPLFASWRNTE 630
GGAR PI P I L+RR+ P QLN L A PLF T+
Sbjct: 39 GGARDPISPKGGPNKISGAAFLKRREGKNPGCPQLNPLEALPLFPGGEKTK 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,534,408
Number of Sequences: 1657284
Number of extensions: 10636691
Number of successful extensions: 22815
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22807
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -