Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2159
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   1.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   4.9  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   6.5  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 317  PMHKPCRSQKIKKYETSLSECGGH 246
            P  K CR +  +++  +LS  GGH
Sbjct: 1298 PWDKVCRGETNRRWSMALSSMGGH 1321


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 124 GRWYLPARTHKKSYQ 168
           GRW L   TH+KS Q
Sbjct: 791 GRWVLDKETHRKSVQ 805


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 76  CPTLQTATHYCFTAEIGRWY-LPARTHKKSYQ*LEKHSPLTWVRYPAST 219
           CP   T +  C      RW  +P  TH + +  +EK+ P  +   P++T
Sbjct: 36  CPGKTTCSQ-CIQTTNCRWCTMPNFTHPRCHGQIEKYCPEEYTVDPSNT 83


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 573 IMHFHRY*TVNKPPFIYHHFKTPKEKRK 656
           +M   RY  + KP F YH + T K  RK
Sbjct: 152 VMALERYIALAKP-FFYHKYVTDKLIRK 178


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,419
Number of Sequences: 2352
Number of extensions: 13611
Number of successful extensions: 232
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)