Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2157
         (575 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7QUX8 Cluster: GLP_577_15796_29142; n=3; root|Rep: GLP...    36   0.90 
UniRef50_Q5CQ62 Cluster: Putative uncharacterized protein; n=1; ...    34   2.1  

>UniRef50_Q7QUX8 Cluster: GLP_577_15796_29142; n=3; root|Rep:
           GLP_577_15796_29142 - Giardia lamblia ATCC 50803
          Length = 4448

 Score = 35.5 bits (78), Expect = 0.90
 Identities = 17/47 (36%), Positives = 28/47 (59%)
 Frame = -3

Query: 216 WISLIVRNTVSEIQICRTVKKKQRFL*KFYRML*PENSRMSCHDFTL 76
           + S IVRNT++E  +C  + K  R+   +  +  PEN R+S + F+L
Sbjct: 185 YCSWIVRNTIAEYTLCSVINKVYRWPDLYSTVYTPENVRLSIYFFSL 231


>UniRef50_Q5CQ62 Cluster: Putative uncharacterized protein; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative
           uncharacterized protein - Cryptosporidium parvum Iowa II
          Length = 677

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -3

Query: 273 SFGVNKFLTIQYFSLTIFCWISLIVRNTVSEIQICRTVKKKQRFL 139
           +F  N     Q+  L I   I+LIV+N   +  I + +K+K+RFL
Sbjct: 406 NFNKNNIYNDQFIELMINIIITLIVKNYTKQTDITKVIKEKERFL 450


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,268,988
Number of Sequences: 1657284
Number of extensions: 8686855
Number of successful extensions: 17145
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17144
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)