Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2155
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11679| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 38 0.007
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 38 0.007
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 38 0.007
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 38 0.007
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 38 0.007
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 38 0.009
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 36 0.027
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 34 0.11
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 33 0.19
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 30 1.3
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_2320| Best HMM Match : TFIID_20kDa (HMM E-Value=2.2) 29 2.3
SB_55837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 29 4.0
SB_7849| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_50218| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09) 28 7.0
SB_4044| Best HMM Match : IncA (HMM E-Value=0.44) 28 7.0
SB_53776| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.5e-12) 27 9.3
>SB_11679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/51 (49%), Positives = 38/51 (74%)
Frame = +2
Query: 239 IGIVSYVHLKQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLK 391
+ I + VH +Q ADR ++ EGVVRD+ERQ ++K +NL L++Q EL K+L+
Sbjct: 18 VTITALVHQQQSADRVRLREGVVRDLERQARKK-KNLEELQEQIELQKRLE 67
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 552 IRPIVSRITIHWPVVLQRRDWE 617
IRPIVSRITIHWP +RRDWE
Sbjct: 18 IRPIVSRITIHWPSFYKRRDWE 39
>SB_36408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 564 VSRITIHWPVVLQRRDWE 617
+SRITIHWP VLQRRDWE
Sbjct: 277 LSRITIHWPSVLQRRDWE 294
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 2 FPSHDVVKRRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 58 FPSHDVVKRRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 626 FPSHDVVKRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 37 FPSHDVVKRRPVNCNTTHYRANW 59
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 39 FPSHDVVKRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 1877 FPSHDVVKRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 37 FPSHDVVKRRPVNCNTTHYRANW 59
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 31 FPSHDVVKRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 80 FPSHDVVKRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 58 FPSHDVVKRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 69 FPSHDVVKRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 45 FPSHDVVKRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2
Query: 617 FPVTTL*NDGPVNCNTTHYRANW 549
FP + PVNCNTTHYRANW
Sbjct: 69 FPSHDVVKRRPVNCNTTHYRANW 91
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 587 PVNCNTTHYRANW 549
PVNCNTTHYRANW
Sbjct: 9 PVNCNTTHYRANW 21
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 37.5 bits (83), Expect = 0.009
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 587 PVNCNTTHYRANW 549
PVNCNTTHYRANW
Sbjct: 9 PVNCNTTHYRANW 21
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 549 PIRPIVSRITIHWP 590
PIRPIVSRITIHWP
Sbjct: 39 PIRPIVSRITIHWP 52
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 549 PIRPIVSRITIHWP 590
PIRPIVS ITIHWP
Sbjct: 41 PIRPIVSHITIHWP 54
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 587 PVNCNTTHYRAN 552
PVNCNTTHYRAN
Sbjct: 86 PVNCNTTHYRAN 97
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 587 PVNCNTTHYRAN 552
PVNCNTTHYRAN
Sbjct: 29 PVNCNTTHYRAN 40
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Frame = +2
Query: 257 VHLKQQADREKMHEGVVRDM--ERQQKRKIENLY------LLEKQNELTKKLKREL 400
VH KQQ EK +EG+ + + E ++ KI+ Y L+E+Q EL +K + ++
Sbjct: 905 VHEKQQNSYEKRNEGLEKKLMDEANERTKIKAKYNDEIQTLIEEQRELVRKYESQI 960
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 416 LLPNYLILFLTFLLVHFVSPKGINFLSFSFVAVPYL-SLLLHASF 285
LLP L L++H+++ KG + SF A+ YL SLL H F
Sbjct: 208 LLPTVFELKALDLIMHYITFKGQVDMYLSFEALKYLASLLCHKKF 252
>SB_2320| Best HMM Match : TFIID_20kDa (HMM E-Value=2.2)
Length = 161
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 296 EGVVRDMERQQKRKIENLYLLEKQNELTKKLKREL 400
EG++ +ER+Q+ +E L + K+NE+ +K +L
Sbjct: 26 EGLLNKIERKQEHLVEFLTSINKENEVNRKSLNQL 60
>SB_55837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 245 IVSYV-HLKQQADREKMHEGVVRDMERQQ 328
I+ Y+ H++Q A+RE + E ++R ERQ+
Sbjct: 20 ILFYISHIQQSAERETLREQIIRPDERQE 48
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +3
Query: 552 IRPIVSRITIHW 587
+RP+VSRITIHW
Sbjct: 33 LRPVVSRITIHW 44
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 272 QADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKREL 400
QAD EK E +V ++ + K+E + LE QN + K +L
Sbjct: 1441 QADFEKQLESLVESTDQLMQEKVEVIQTLEGQNAKIEAEKEQL 1483
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 266 KQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRELGS 406
+++ +REK E RD ER+++++ E EK+ E K+ R+ S
Sbjct: 624 EREKEREKEKEKEERDKEREKEKEKEKEREKEKEREREKERDRDKSS 670
>SB_7849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 564 VSRITIHWPVVLQRRDWE 617
+SRIT VVLQRRDWE
Sbjct: 88 LSRITNSLAVVLQRRDWE 105
>SB_50218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 266 KQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKR 394
+ D+++ H G RD +R+++R EN Y EK + ++ KR
Sbjct: 32 RDHRDQDRDHRGRHRDRDREERRHKENAY-FEKPSRDDQEGKR 73
>SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09)
Length = 435
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 339 IFLFCCRSISLTTPSCIFSLSACCFR*TYDTIPIVIEQERPKTNLELEE-DIRP 181
I+L+C R + + + ACC T +T P V+E E TNL + ++RP
Sbjct: 332 IYLYCMRDMRKRVREILSRVCACCV--TMETTPPVVEIE--ITNLPHQRLEVRP 381
>SB_4044| Best HMM Match : IncA (HMM E-Value=0.44)
Length = 222
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 310 RYGTATKEKDRKFIPFGETK*TNKKVKKRIR 402
R+G A++EK + PF ET+ +K+KKR+R
Sbjct: 188 RHGLASREKKSRKGPFLETR---EKIKKRLR 215
>SB_53776| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.5e-12)
Length = 640
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 7 WTYQXXXXXHYKNNHKLNHSKMLSSKN*RTKSK 105
WT Q HY + +K+ H + S KN + K++
Sbjct: 202 WTTQIADGMHYLHGNKIIHRDLKSPKNSKPKNR 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,948,904
Number of Sequences: 59808
Number of extensions: 276630
Number of successful extensions: 3791
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3777
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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