BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2155
(621 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119645-1|AAM50299.1| 125|Drosophila melanogaster RE44650p pro... 70 2e-12
AE014134-78|AAF51513.1| 125|Drosophila melanogaster CG11562-PA ... 70 2e-12
BT030116-1|ABN49255.1| 286|Drosophila melanogaster IP11147p pro... 29 6.7
AE014297-540|AAF54077.2| 286|Drosophila melanogaster CG1984-PA ... 29 6.7
AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p pro... 28 8.9
AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH1197... 28 8.9
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P... 28 8.9
AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA... 28 8.9
>AY119645-1|AAM50299.1| 125|Drosophila melanogaster RE44650p
protein.
Length = 125
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/59 (54%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +2
Query: 233 ITIGIVSYVHLKQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLK-RELGS 406
I+ I+ YVH KQ ADR ++H+GV+RD+E+QQ+RK EN Y L++Q ++TK+LK RE S
Sbjct: 15 ISTAIIGYVHYKQSADRLRLHDGVLRDVEQQQRRKHENTYTLQQQIDMTKQLKAREASS 73
>AE014134-78|AAF51513.1| 125|Drosophila melanogaster CG11562-PA
protein.
Length = 125
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/59 (54%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = +2
Query: 233 ITIGIVSYVHLKQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLK-RELGS 406
I+ I+ YVH KQ ADR ++H+GV+RD+E+QQ+RK EN Y L++Q ++TK+LK RE S
Sbjct: 15 ISTAIIGYVHYKQSADRLRLHDGVLRDVEQQQRRKHENTYTLQQQIDMTKQLKAREASS 73
>BT030116-1|ABN49255.1| 286|Drosophila melanogaster IP11147p
protein.
Length = 286
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 236 TIGIVSYVHLKQQADREKMHEGVVRDMERQQ-KRKIENLYLLEKQNELTKKLKRE 397
+IG++ + + MH D+E+ Q +RK NL L E++ E +K+ +E
Sbjct: 51 SIGVIHVIKNEYYGLPNPMHRKFREDLEKHQDRRKESNLSLKEEKREDLEKMLKE 105
>AE014297-540|AAF54077.2| 286|Drosophila melanogaster CG1984-PA
protein.
Length = 286
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 236 TIGIVSYVHLKQQADREKMHEGVVRDMERQQ-KRKIENLYLLEKQNELTKKLKRE 397
+IG++ + + MH D+E+ Q +RK NL L E++ E +K+ +E
Sbjct: 51 SIGVIHVIKNEYYGLPNPMHRKFREDLEKHQDRRKESNLSLKEEKREDLEKMLKE 105
>AY051941-1|AAK93365.1| 565|Drosophila melanogaster LD41932p
protein.
Length = 565
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 266 KQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRE 397
+++ +EK +++ ER++K K E L+++ EL KK ++E
Sbjct: 6 REEKIKEKERVEKIKEKEREEKLKKEKEEKLKEKEELLKKKEKE 49
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 266 KQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRE 397
+++ +EK ++D+E++ K K + L EK+ EL K K+E
Sbjct: 88 REEKLKEKERAEKLKDLEKEVKLKEKEEQLKEKEKELKLKEKKE 131
>AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH11973
protein.
Length = 800
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 263 LKQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRE 397
LKQ+ ++ + H+ +++ + QQ R+++ EKQ ++ KRE
Sbjct: 448 LKQEEEQARTHQKELKENQEQQLRELKAKQEREKQERDYQQQKRE 492
>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
protein.
Length = 1168
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 266 KQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRE 397
+++ +EK +++ ER++K K E L+++ EL KK ++E
Sbjct: 609 REEKIKEKERVEKIKEKEREEKLKKEKEEKLKEKEELLKKKEKE 652
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 266 KQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRE 397
+++ +EK ++D+E++ K K + L EK+ EL K K+E
Sbjct: 691 REEKLKEKERAEKLKDLEKEVKLKEKEEQLKEKEKELKLKEKKE 734
>AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA
protein.
Length = 800
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 263 LKQQADREKMHEGVVRDMERQQKRKIENLYLLEKQNELTKKLKRE 397
LKQ+ ++ + H+ +++ + QQ R+++ EKQ ++ KRE
Sbjct: 448 LKQEEEQARTHQKELKENQEQQLRELKAKQEREKQERDYQQQKRE 492
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,726,966
Number of Sequences: 53049
Number of extensions: 398247
Number of successful extensions: 1167
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -