Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2154
(635 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 1.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 1.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 1.4
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 23 2.5
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 3.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 7.6
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 7.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 7.6
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 504 DGGIRDVRSWTRCWLG 551
DGG ++ W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 504 DGGIRDVRSWTRCWLG 551
DGG ++ W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 504 DGGIRDVRSWTRCWLG 551
DGG ++ W RC LG
Sbjct: 614 DGGRAEINEWERCNLG 629
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 511 GYVMFGAGLAVGLVNL 558
G+V GAGLAVG L
Sbjct: 90 GFVHLGAGLAVGFSGL 105
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 22.6 bits (46), Expect = 3.3
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 9/49 (18%)
Frame = +3
Query: 123 FLSYL-FVLLVGLAIPIFSLYYVLNG--------KGEQISLGWFLENTS 242
F S+L F+LLV +A+ +++ V N K ++I G+FL + S
Sbjct: 84 FASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSES 132
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 610 SRLEQLQSPRYQQQFHRIDSPSQQRVQ 530
S+ Q Q P+ QQQ + P QQ Q
Sbjct: 1497 SQKTQQQQPQQQQQQQQQQQPQQQSQQ 1523
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 616 SQSRLEQLQSPRYQQQFHRIDSPSQQR 536
SQ +Q P+ QQQ + P QQ+
Sbjct: 1521 SQQPQQQQPQPQQQQQQQQQQQPQQQQ 1547
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 4.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 308 HGCSDNGQGNGKGDS 264
+G +DNG GNG ++
Sbjct: 252 NGANDNGNGNGASNN 266
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 290 GQGNGKGDSEGTPHIRG 240
G+G+GKG S G RG
Sbjct: 83 GRGHGKGGSRGRGGNRG 99
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 138 FVLLVGLAIPIFSLYYVL 191
F +L G+A+ +LYY L
Sbjct: 5 FEILCGIAVLFLALYYYL 22
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +3
Query: 111 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 218
K ++ L + VG++ ++Y+ + GE++SL
Sbjct: 235 KTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSL 270
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = +3
Query: 111 KMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQISL 218
K ++ L + VG+ ++Y+ + GE++SL
Sbjct: 248 KTLFYTVNLIIPCVGITFLTVLVFYLPSDSGEKVSL 283
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,076
Number of Sequences: 438
Number of extensions: 4473
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -