Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2153
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0062 + 28122857-28123771                                         29   3.1  
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640...    29   4.1  
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544...    29   4.1  
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586...    29   4.1  
05_03_0135 - 8802462-8803355                                           27   9.4  

>11_08_0062 + 28122857-28123771
          Length = 304

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 585 IDF*FDFKSTNHYDDFIKNIFTFSK 511
           IDF  D  + +HYDD  +N++ ++K
Sbjct: 150 IDFFIDQGAPDHYDDLARNLYAYNK 174


>09_02_0577 -
           10862976-10863215,10863653-10863788,10863906-10864030,
           10864132-10864516,10864571-10864798,10864976-10865319
          Length = 485

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 230 EQQMTVNGHRTTYLHKSRNRY 168
           EQQM + GHR + L K  NRY
Sbjct: 407 EQQMVMPGHRESNLQKELNRY 427


>09_02_0576 -
           10853361-10853600,10854033-10854168,10854285-10854409,
           10854487-10854871,10854934-10855161,10855332-10855675
          Length = 485

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 230 EQQMTVNGHRTTYLHKSRNRY 168
           EQQM + GHR + L K  NRY
Sbjct: 407 EQQMVMPGHRESNLQKELNRY 427


>03_02_0140 +
           5864612-5864955,5865154-5865381,5865460-5865814,
           5865899-5866023,5866150-5866285,5866382-5866621
          Length = 475

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 230 EQQMTVNGHRTTYLHKSRNRY 168
           EQQM + GHR + L K  NRY
Sbjct: 397 EQQMVMPGHRESNLQKELNRY 417


>05_03_0135 - 8802462-8803355
          Length = 297

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 585 IDF*FDFKSTNHYDDFIKNIFTFSKERK 502
           IDF  D  +T HYD+  + ++  +K+ K
Sbjct: 145 IDFFIDQGATEHYDELARRLYAHNKDYK 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,057,929
Number of Sequences: 37544
Number of extensions: 216228
Number of successful extensions: 269
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)