Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2152
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.1  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 15/61 (24%), Positives = 24/61 (39%)
 Frame = -1

Query: 379 CLDSRNSFVSFMTESLEGSGQSSKTMVIADGPSGLSSGITLTIDETTCSHPSSLSAITCS 200
           C+D  N+F     E  EG+  +  T   +  P   +      I +  C+  +     TCS
Sbjct: 83  CVDKINAFQCICKEGWEGALCNINTDDCSPNPCRNNGSCVDRIADFECNCKNGWKGKTCS 142

Query: 199 L 197
           L
Sbjct: 143 L 143


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +3

Query: 420 NMCVVLGCIAEKLAGPNSVAVLTEETLDFLLAFLDT--NFEPVHSALRT 560
           N  ++   + ++L  PN V++  E    +    LDT  NF  V    RT
Sbjct: 182 NQLIIYDDLRDQLLMPNDVSITDEPAYQYRGIALDTSRNFVTVDVIKRT 230


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/40 (22%), Positives = 19/40 (47%)
 Frame = -3

Query: 587 CERTFSRAISAKSTMHGLEVGVQKCKEKVERLLGEYSDAV 468
           CER F  +     T H ++  +  C +++  + G  ++ V
Sbjct: 241 CERLFEASREEYVTRHLIDGRIIGCDQRISFIAGYMTEEV 280


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 158 YHLFQEKDAQKSKSYSTKLQYYKTDFKSLESIYAM*F 48
           YH   +  + K      KL+Y++  F SL S  ++ F
Sbjct: 70  YHAIFDLISFKDSDLQQKLRYFEEVFSSLLSCCSVIF 106


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 158 YHLFQEKDAQKSKSYSTKLQYYKTDFKSLESIYAM*F 48
           YH   +  + K      KL+Y++  F SL S  ++ F
Sbjct: 70  YHAIFDLISFKDSDLQQKLRYFEEVFSSLLSCCSVIF 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,576
Number of Sequences: 336
Number of extensions: 2920
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)