Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2152
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0311 + 2322511-2323527 33 0.13
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386... 31 0.94
01_01_0051 + 389051-389623 31 0.94
01_01_0742 + 5759505-5759639,5760497-5760593,5760694-5760755,576... 29 2.2
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 29 3.8
02_03_0147 - 15738479-15738650,15739015-15739256 29 3.8
01_06_0441 + 29417004-29417114,29417213-29417311,29417405-294175... 29 3.8
09_04_0002 - 13567257-13567373,13568049-13568243,13569750-135698... 28 5.0
04_01_0519 + 6831912-6831978,6832333-6832488,6832748-6833098,683... 28 5.0
01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093 28 5.0
01_01_0391 + 3015864-3016179,3016933-3017756,3017841-3018107,301... 28 5.0
07_03_0478 + 18556773-18556883,18557219-18557318,18557807-185595... 28 6.7
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 28 6.7
03_05_0328 - 23170019-23170168,23170865-23170903,23171043-231711... 28 6.7
02_04_0327 - 22063453-22063725,22064093-22064404,22064724-220648... 28 6.7
01_01_1214 - 9793854-9794003,9795418-9795456,9795604-9795702,979... 28 6.7
10_08_0019 - 14167952-14171059 27 8.8
10_07_0077 + 12645091-12646750,12647612-12648273 27 8.8
02_05_1134 - 34352154-34352375,34353683-34353746,34353820-343548... 27 8.8
>11_01_0311 + 2322511-2323527
Length = 338
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -1
Query: 298 IADGPSGLSSGITLTIDETTCSHPSSLSAITC-SLTSRTGDSSSPSIAI-IFFRKRMRRN 125
+ D S + G D C+ PSS TC S +S T SSSP++++ + +R +
Sbjct: 13 VRDFASCIGDGAVRVADVAACTAPSSTRVSTCSSSSSTTASSSSPTLSVTVSYRATLLAA 72
Query: 124 RSPIPLNYSTT 92
+P PL T
Sbjct: 73 PAP-PLQLRLT 82
>04_04_0844 -
28637393-28638118,28638206-28638283,28638431-28638607,
28639124-28639537
Length = 464
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 505 KSSVSSVSTATLFGPASFSAIHPRTTHILRFIFTSRAFESARCLD 371
KSS ++A FGP S + + RTT L FT++A+ + LD
Sbjct: 412 KSSSLRKASAHAFGPGSCAPVAQRTTASLHSKFTNKAYPGSGRLD 456
>01_01_0051 + 389051-389623
Length = 190
Score = 30.7 bits (66), Expect = 0.94
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -1
Query: 262 TLTIDETTCSHPSSLSAITCSLTSRTGDSSSPSIAIIFFRKRMRRNRSPIP 110
T + E++ S SS S + S +S + +SSS S R+R +RN SP P
Sbjct: 100 TSSSSESSSSSSSSSSESSSSSSSSSSESSSSSSDDDLARRRQQRNPSPPP 150
>01_01_0742 +
5759505-5759639,5760497-5760593,5760694-5760755,
5760842-5760898,5761062-5761118,5761501-5761534,
5761788-5761822,5761956-5762046,5762312-5762633,
5762710-5762845,5763031-5763120
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 316 SSKTMVIADGPSGLSSGITLTIDETTCSHPSSLSAITCSLTSRTG 182
SSK + DG S G + +D T H SS+S +T S G
Sbjct: 262 SSKRTDLGDGCGSQSQGNRIHLDYTVGGHTSSVSCVTFSAFGEKG 306
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 282 LGPSAITIVFDDCPLPSRDSVIKLTKLFRLSRQRALSNAL 401
L S+IT+ FDD P +S ++L KL R + +AL
Sbjct: 99 LKDSSITVAFDDIPEDGLNSPLRLEKLANEVTYRRMKDAL 138
>02_03_0147 - 15738479-15738650,15739015-15739256
Length = 137
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 543 ARARSWCPEMQGESRASPR*VQRRCSGPP 457
AR R WC + + R+ PR +RRC+ P
Sbjct: 42 ARRREWCGQRRRGRRSPPRTRRRRCAVRP 70
>01_06_0441 +
29417004-29417114,29417213-29417311,29417405-29417534,
29417673-29417765,29417892-29417982,29418166-29418222,
29419200-29419320,29420183-29420331,29420675-29420891
Length = 355
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -1
Query: 601 LFSGGVSELSQGRLVRRALCTGSKLVSRNARRKSSVSSVSTATLFGPASFSAIHPRTTHI 422
+ +G + +S R++ R + K + N R S+ S+A P + IH T H+
Sbjct: 287 IITGVILLVSSTRIIARLPRSMQKFLKSNVERTHSIRRPSSARGKDPIPSTTIHASTLHL 346
Query: 421 L 419
L
Sbjct: 347 L 347
>09_04_0002 -
13567257-13567373,13568049-13568243,13569750-13569869,
13569958-13570028,13570066-13570126,13570170-13570202,
13570303-13570431,13571958-13572042,13572143-13572252,
13572534-13572606,13572688-13572810,13573111-13573289,
13573659-13573736,13573813-13573871,13574122-13574212,
13574265-13574442,13574553-13575088
Length = 745
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +3
Query: 117 GLRFLRILFLKKMIAMLGDEESPVLLVKLHVIADKEEGWLQVVSSMVNVIPLDNPLGPSA 296
GL+ L ++ ++A+LG+E P L + +K WL + ++ I D+P
Sbjct: 163 GLKLLAVI-RADLLALLGEENLPALRALDGYLKEKLVTWLSPAALTLHQITWDDPASLLE 221
Query: 297 ITIVFDDC 320
+ ++ C
Sbjct: 222 KIVAYEVC 229
>04_01_0519 +
6831912-6831978,6832333-6832488,6832748-6833098,
6833481-6833662,6833756-6834004,6834182-6834406,
6837492-6837791,6838642-6839215,6839959-6840059
Length = 734
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 219 KEEGWLQVVSSMVNVIPLDNPLGPSAITIVF 311
KE LQ + S+++++P D LGP F
Sbjct: 404 KELAGLQEIDSLISIVPADKALGPDGFNGFF 434
>01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093
Length = 324
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 608 QGFVFGWCERTFSRAISAKSTMHGLEVGVQKCKEK 504
+G V GW RT + + MH L + VQ K +
Sbjct: 48 EGLVAGWLRRTVIQPLETLRAMHKLALDVQSLKAR 82
>01_01_0391 +
3015864-3016179,3016933-3017756,3017841-3018107,
3018505-3018762,3018950-3018997
Length = 570
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = -1
Query: 424 ILRFIFTSRAFESARCLDSRNSFV-SFMTESLEGSGQSSKTMVIADGPSGLSSGITLTID 248
+LRF+ RAF+ LD +F+ + +T G + + SG+SS +D
Sbjct: 198 LLRFLCIDRAFDRQETLDRFVAFINNVLTRRAAGQSDAGVEELTISLKSGMSSVDVAEVD 257
Query: 247 ---ETTCSHPSSLSAITCSLTSRTGDSSS 170
H S+ + ++ R+G++S+
Sbjct: 258 AWIRYGMQHVSNTFTLELNIPLRSGNNSN 286
>07_03_0478 +
18556773-18556883,18557219-18557318,18557807-18559513,
18559709-18560094,18560175-18560246,18560366-18560455
Length = 821
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -1
Query: 229 PSSLSAITCSLTSRTGDSSSPSIAIIFFRKRMRRNR 122
P S SA +L+SR GDS P I FR ++ RNR
Sbjct: 245 PDSSSA--AALSSRGGDSGIPLSTQIEFRTKIDRNR 278
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/97 (25%), Positives = 39/97 (40%)
Frame = -1
Query: 490 SVSTATLFGPASFSAIHPRTTHILRFIFTSRAFESARCLDSRNSFVSFMTESLEGSGQSS 311
++ A F P + + +H LR S A A LD ++ ++ SG
Sbjct: 136 AIDEALKFVPEQVPTVLAKISHDLRSKAASSAPSLADLLDRLAKLMAPKSKMQSSSGS-- 193
Query: 310 KTMVIADGPSGLSSGITLTIDETTCSHPSSLSAITCS 200
ADG SG SSG T+ + + L A++ S
Sbjct: 194 -----ADGSSGSSSGRGQTLGSLNIKNDTELMAVSAS 225
>03_05_0328 - 23170019-23170168,23170865-23170903,23171043-23171141,
23171214-23171342,23171915-23172061,23172959-23173089,
23173938-23174157,23174294-23174387,23174469-23174581,
23174727-23174861,23175231-23175335,23175440-23175544,
23176240-23176327,23176415-23176536,23176611-23176670,
23177434-23177529,23177620-23177772,23177865-23177951,
23179179-23179246,23179603-23179726,23180235-23180330,
23180430-23180539,23180647-23180761,23181622-23181699,
23181843-23181908,23182203-23182363,23182781-23183099
Length = 1069
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +3
Query: 360 LFRLSRQRALSNALDVKMKRNMCVVLGCIA--EKL--AGPNSVAVLTEETLDFLLAFLDT 527
+F L RAL++ALD+ +K ++ V L I +KL A + VL + F+L LDT
Sbjct: 849 VFELYGDRALADALDISLKMSLSVPLSDILAFKKLSKAFYGYIEVLFSNHITFVLN-LDT 907
Query: 528 N 530
N
Sbjct: 908 N 908
>02_04_0327 -
22063453-22063725,22064093-22064404,22064724-22064859,
22065901-22065974,22066084-22066221
Length = 310
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 610 TKALFSGGVSELSQGRLVRRALCTGSKL 527
T A+F V++L L +R +C+GSK+
Sbjct: 52 TPAMFGAPVTDLEAEDLTKRKMCSGSKM 79
>01_01_1214 -
9793854-9794003,9795418-9795456,9795604-9795702,
9795779-9795907,9796473-9796619,9797513-9797643,
9798497-9798716,9798858-9798951,9799021-9799133,
9799799-9799903,9800008-9800112,9800762-9800849,
9800933-9801054,9801130-9801189,9802313-9802408,
9802506-9802658,9802752-9802838,9803995-9804062,
9804429-9804552,9805057-9805152,9805250-9805359,
9805459-9805573,9806877-9806942,9807260-9807420,
9807927-9808167
Length = 972
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +3
Query: 360 LFRLSRQRALSNALDVKMKRNMCVVLGCIA--EKL--AGPNSVAVLTEETLDFLLAFLDT 527
+F L RAL++ALD+ +K ++ V L I +KL A + VL + F+L LDT
Sbjct: 752 VFELYGDRALADALDISLKMSLSVPLSDILAFKKLSKAFYGYIEVLFSSHITFVLN-LDT 810
Query: 528 N 530
N
Sbjct: 811 N 811
>10_08_0019 - 14167952-14171059
Length = 1035
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -1
Query: 415 FIFTSRAFESARCLDSRNSFVSFMTESLEGSGQSSKTMVIADGPSGLSSGITLTI 251
F ++R + D RN + + L G Q + T+++ P GL +TLT+
Sbjct: 374 FTGSTRDEQGNALFDKRNVTFNAVFSGLVGIFQQAVTIIVVAIPEGLPLAVTLTL 428
>10_07_0077 + 12645091-12646750,12647612-12648273
Length = 773
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 226 SSLSAITCSLTSRTGDSSSPSIAIIFFRK 140
+ +S ITC R GD + PS +++F +K
Sbjct: 655 TKMSNITCPRKFRPGDLNYPSFSVVFKKK 683
>02_05_1134 - 34352154-34352375,34353683-34353746,34353820-34354859,
34355193-34355261,34355502-34355606,34355992-34356161,
34356244-34356351,34356397-34356525,34356577-34356681,
34357186-34357475,34357575-34357679,34358195-34358289,
34358474-34358569,34358660-34358782,34359120-34359174,
34359254-34359417,34359881-34359971,34360180-34360334,
34360823-34361002,34361314-34361487,34361776-34361917,
34362023-34362325,34362443-34362522
Length = 1354
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 258 NVIPLDNPLGPSAITIVFDDCPLPSRDSVIKLTKLFRLSRQRA 386
+V+ +D P T+VFD C + ++ KL R++R+RA
Sbjct: 1207 SVMTIDAPPESRLATLVFDQCHAAGVE-LVNAPKLLRVARRRA 1248
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,482,805
Number of Sequences: 37544
Number of extensions: 381605
Number of successful extensions: 1154
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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