Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2152
(610 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 101 4e-22
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.21
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 30 1.5
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 29 2.0
U29381-9|AAA68749.2| 503|Caenorhabditis elegans Prion-like-(q/n... 29 2.0
U29381-4|AAM98023.1| 511|Caenorhabditis elegans Prion-like-(q/n... 29 2.0
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical... 28 6.0
AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical ... 27 7.9
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 27 7.9
AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 101 bits (242), Expect = 4e-22
Identities = 47/117 (40%), Positives = 75/117 (64%)
Frame = +3
Query: 171 DEESPVLLVKLHVIADKEEGWLQVVSSMVNVIPLDNPLGPSAITIVFDDCPLPSRDSVIK 350
++E P L+KL+ IAD+E+GW VV +++ IP ++PLGP+ I++ D+CPLPSR+SV
Sbjct: 130 EQEPPQSLLKLNFIADEEKGWTMVVRALIYTIPENDPLGPAVISLFLDECPLPSRESVQT 189
Query: 351 LTKLFRLSRQRALSNALDVKMKRNMCVVLGCIAEKLAGPNSVAVLTEETLDFLLAFL 521
L LS + S L +NMC+VLG +AEK+AG +V + ++ +L+ +
Sbjct: 190 LLLSLGLSSEFVDSKHLPPSWHKNMCIVLGSLAEKMAGSAAVTMFNDKIKGYLMKII 246
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.21
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 8/152 (5%)
Frame = -1
Query: 595 SGGVSELSQGRLVRRALCTGSKLVSRNARRKSSVS-SVSTATLFGPASFSAIHPRTTHIL 419
+G ++ Q + TGS +++ SS + S ST T PA S+ TT +
Sbjct: 808 TGSITSTQQATSTSSVITTGSTSAPQSSTAVSSTTTSPSTTTGSTPAPQSSTVASTTTVS 867
Query: 418 RFIFTSRAFESARCLDSRNSFVSFMTESLEGSGQSSKTMV----IADG---PSGLSSGIT 260
+ T C N+F + T+ L S S +A P G SS
Sbjct: 868 PYTTTE-----CICTTVSNTFGTSTTQGLTSSSAQSTASTGVSTVASSTTIPQGSSSSSP 922
Query: 259 LTIDETTCSHPSSLSAITCSLTSRTGDSSSPS 164
+ + SS SA T +++S +SSP+
Sbjct: 923 QSPTSAQPAQSSSTSAATVTVSSSQSPTSSPA 954
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.5
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = -1
Query: 502 SSVSSVSTATLFGPASFSAIHPRTTHILRFIFTSRAFESARCLDSRNSFVSFMTESLEGS 323
++V+S T+T P S S + + TS ES + S S T S +
Sbjct: 284 TTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTST--TFTSTASTSTSSTSTT 341
Query: 322 GQSSKTMVIADGPSGLSSGI-TLTIDETTCSHPSSLSAITCSLTSRTGDSSS 170
QSS T+ + + LS+ I T T E T + S CS T S++
Sbjct: 342 QQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTT 393
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.9 bits (64), Expect = 1.5
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = -1
Query: 502 SSVSSVSTATLFGPASFSAIHPRTTHILRFIFTSRAFESARCLDSRNSFVSFMTESLEGS 323
++V+S T+T P S S + + TS ES + S S T S +
Sbjct: 284 TTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTST--TFTSTASTSTSSTSTT 341
Query: 322 GQSSKTMVIADGPSGLSSGI-TLTIDETTCSHPSSLSAITCSLTSRTGDSSS 170
QSS T+ + + LS+ I T T E T + S CS T S++
Sbjct: 342 QQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTT 393
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 29.5 bits (63), Expect = 2.0
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = -1
Query: 523 SRNARRKSSVSSVSTATLFGPASFSAIHPRTTHILRFIFTSRAFESARCLDSRNSFVSFM 344
S A S SS S+++ AS ++ TT T+ + S +S +S S
Sbjct: 58 SSTAATSSDDSSSSSSSSSSSASSTSSSDTTT--ADSSSTTSSDSSTTSSNSSSSTSSSD 115
Query: 343 TESLEGSGQSSKTMVIADGPSGLSSGIT---LTIDETTCSHPSSLSAITCSLTSRTGDSS 173
+ S+ S SS T D S +S T T + + A TCSL S + DSS
Sbjct: 116 STSVVSSTSSSTTTTCVDSFSTCTSWAANGFCTSSFYTTAIKTQYCAATCSLCSSSSDSS 175
Query: 172 SPS 164
S S
Sbjct: 176 SSS 178
>U29381-9|AAA68749.2| 503|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 35,
isoform a protein.
Length = 503
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 207 VIADKEEGWLQVVSSMVNVIPLDNPLGP----SAITIVFDDCPLPSRDS 341
+ ADKE+ W SS NVI D L P + I DD P+ S D+
Sbjct: 442 ISADKEKAWAPPASSEENVISPDASLEPINDGKFLPIRSDDKPIDSADA 490
>U29381-4|AAM98023.1| 511|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 35,
isoform b protein.
Length = 511
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 207 VIADKEEGWLQVVSSMVNVIPLDNPLGP----SAITIVFDDCPLPSRDS 341
+ ADKE+ W SS NVI D L P + I DD P+ S D+
Sbjct: 450 ISADKEKAWAPPASSEENVISPDASLEPINDGKFLPIRSDDKPIDSADA 498
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = -1
Query: 331 EGSGQSSKTMVIADGPSGLSSGITLTIDETTCSHPSSLSAITCSLTSRTGDSSSPSIAII 152
E + + T + + S+ T T T+ S PS+ ++ T + T+ + SS+P A+
Sbjct: 512 EEDKEETSTTTSSTTSTEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAPIRAVR 571
Query: 151 FFRKRMRRNRSPIPLNYSTTK 89
RR + P +T +
Sbjct: 572 TSTPTTRRTTTTTPRRTTTPR 592
>AL132862-27|CAB60564.1| 682|Caenorhabditis elegans Hypothetical
protein Y73F8A.35 protein.
Length = 682
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 136 MRRNRSPIPLNYSTTKLILKVLKAFMQCNF*DSHILNKCPG 14
M+ N + +Y T IL +LK NF D+ IL K PG
Sbjct: 451 MKGNAKKLQTHYDTRATILDILKYQSTTNFLDTEIL-KIPG 490
>AF067949-4|AAC19237.1| 415|Caenorhabditis elegans Hypothetical
protein T10H9.3 protein.
Length = 415
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 165 LGDEESPVLLVKLHVIADKEEGWLQVVSSMVNVIPLDNPLGPSAITIVFDD 317
L +E+S V + K ++ ++ GW + V ++P D P+ A I+F +
Sbjct: 228 LVEEKSNVKIQKEDLLDGEDAGWDGIDELDVLIVPQDKPVQNRASPIIFKE 278
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 356 ETVPAVEATCTLERPRREDETQYVRCPRVY--CRETGG 463
E P+ ++T E P E++TQ CP Y CR+ G
Sbjct: 625 EKCPSCKSTIFFEEPGNENKTQNRSCPCGYSWCRDCKG 662
>AC006807-3|AAK84617.1| 883|Caenorhabditis elegans Hypothetical
protein Y58A7A.3 protein.
Length = 883
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 356 ETVPAVEATCTLERPRREDETQYVRCPRVY--CRETGG 463
E P+ ++T E P E++TQ CP Y CR+ G
Sbjct: 606 EKCPSCKSTIFFEEPGNENKTQNRSCPCGYSWCRDCKG 643
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,617
Number of Sequences: 27780
Number of extensions: 313923
Number of successful extensions: 1051
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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