Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2148
(325 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 83 2e-16
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 83 2e-16
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 83 2e-16
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 83 2e-16
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 83 2e-16
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 83 2e-16
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 76 2e-14
AK128281-1|BAC87365.1| 121|Homo sapiens protein ( Homo sapiens ... 29 3.2
U80082-1|AAD00351.1| 795|Homo sapiens putative protein B2 protein. 28 7.4
AK128543-1|BAC87492.1| 1433|Homo sapiens protein ( Homo sapiens ... 28 7.4
AB020633-1|BAA74849.1| 1236|Homo sapiens KIAA0826 protein protein. 28 7.4
AK124863-1|BAC85971.1| 246|Homo sapiens protein ( Homo sapiens ... 27 9.8
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M S +EL C+YSALIL DD+V T +KI+ ++KAA V VEP+WP LF+KAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 244 TNIGS 258
N+G+
Sbjct: 61 CNVGA 65
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M S +EL C+YSALIL DD+V T +KI+ ++KAA V VEP+WP LF+KAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 244 TNIGS 258
N+G+
Sbjct: 61 CNVGA 65
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M S +EL C+YSALIL DD+V T +KI+ ++KAA V VEP+WP LF+KAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 244 TNIGS 258
N+G+
Sbjct: 61 CNVGA 65
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M S +EL C+YSALIL DD+V T +KI+ ++KAA V VEP+WP LF+KAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 244 TNIGS 258
N+G+
Sbjct: 61 CNVGA 65
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M S +EL C+YSALIL DD+V T +KI+ ++KAA V VEP+WP LF+KAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 244 TNIGS 258
N+G+
Sbjct: 61 CNVGA 65
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M S +EL C+YSAL+L DD+V T +KI+ ++KAA V VEP+WP LF+KAL +N+ LI
Sbjct: 1 MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 244 TNIGS 258
N+G+
Sbjct: 61 CNVGA 65
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M S +EL +YSALIL DD+V T +KI+ ++KAA V VEP+WP LF+KAL +N+ LI
Sbjct: 1 MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 244 TNIGS 258
++G+
Sbjct: 61 CDVGA 65
>AK128281-1|BAC87365.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ46418 fis, clone THYMU3012907. ).
Length = 121
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 235 QGH*CLPRLWRTDLANMA--LHIQPPLSRWWKFSHQLRQHHHPPG 107
+GH CLP ++ LA + +H Q L W HQ HPPG
Sbjct: 4 RGHCCLPGGAKSGLAGSSAPVHRQGRLRTVWAPQHQRVAPWHPPG 48
>U80082-1|AAD00351.1| 795|Homo sapiens putative protein B2 protein.
Length = 795
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 LRQLARSKLKMVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVE-PYWPSLFSK 210
L +L L + ++ L +YS L +D A + I+K YV+ PYW
Sbjct: 433 LAELLEKGLSSMQQSLLQIIYSLLSHIDLSAAPAKQFNLEIIKIIGKYVQSPYWK----- 487
Query: 211 ALEGINVLDLITN 249
E +N+L L+ +
Sbjct: 488 --EALNILKLVVS 498
>AK128543-1|BAC87492.1| 1433|Homo sapiens protein ( Homo sapiens cDNA
FLJ46702 fis, clone TRACH3014183. ).
Length = 1433
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 LRQLARSKLKMVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVE-PYWPSLFSK 210
L +L L + ++ L +YS L +D A + I+K YV+ PYW
Sbjct: 1016 LAELLEKGLSSMQQSLLQIIYSLLSHIDLSAAPAKQFNLEIIKIIGKYVQSPYWK----- 1070
Query: 211 ALEGINVLDLITN 249
E +N+L L+ +
Sbjct: 1071 --EALNILKLVVS 1081
>AB020633-1|BAA74849.1| 1236|Homo sapiens KIAA0826 protein protein.
Length = 1236
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 34 LRQLARSKLKMVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVE-PYWPSLFSK 210
L +L L + ++ L +YS L +D A + I+K YV+ PYW
Sbjct: 409 LAELLEKGLSSMQQSLLQIIYSLLSHIDLSAAPAKQFNLEIIKIIGKYVQSPYWK----- 463
Query: 211 ALEGINVLDLITN 249
E +N+L L+ +
Sbjct: 464 --EALNILKLVVS 474
>AK124863-1|BAC85971.1| 246|Homo sapiens protein ( Homo sapiens
cDNA FLJ42873 fis, clone BRHIP2026061. ).
Length = 246
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -2
Query: 324 AGEHGCNRRGWGSTRGW 274
AG GC R W RGW
Sbjct: 137 AGTRGCRERQWHGARGW 153
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,264,084
Number of Sequences: 237096
Number of extensions: 1004534
Number of successful extensions: 1755
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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