Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2148
(325 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 111 2e-25
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 111 2e-25
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 111 2e-25
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 105 2e-23
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,... 27 4.2
AY060788-1|AAL28336.1| 373|Drosophila melanogaster GH25868p pro... 27 5.6
AE014296-2491|AAF49653.1| 373|Drosophila melanogaster CG7011-PA... 27 5.6
BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p pro... 27 7.3
AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p pro... 27 7.3
AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p pro... 27 7.3
AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA... 27 7.3
AE014297-2326|AAF55397.1| 643|Drosophila melanogaster CG5265-PA... 27 7.3
AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB... 27 7.3
AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA... 27 7.3
BT023787-1|AAZ41796.1| 662|Drosophila melanogaster LD01568p pro... 26 9.7
AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p pro... 26 9.7
AE014297-453|ABI31145.1| 657|Drosophila melanogaster CG1041-PB,... 26 9.7
AE014297-452|AAF54128.2| 662|Drosophila melanogaster CG1041-PA,... 26 9.7
AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-P... 26 9.7
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 111 bits (267), Expect = 2e-25
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M +KAEL CVY++LILVDDDVA TGEKI+TILKAA V VEPYWP LF+KALEGINV DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 244 TNIGSEV 264
TNIGS V
Sbjct: 61 TNIGSGV 67
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 111 bits (267), Expect = 2e-25
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M +KAEL CVY++LILVDDDVA TGEKI+TILKAA V VEPYWP LF+KALEGINV DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 244 TNIGSEV 264
TNIGS V
Sbjct: 61 TNIGSGV 67
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 111 bits (267), Expect = 2e-25
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M +KAEL CVY++LILVDDDVA TGEKI+TILKAA V VEPYWP LF+KALEGINV DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 244 TNIGSEV 264
TNIGS V
Sbjct: 61 TNIGSGV 67
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 105 bits (251), Expect = 2e-23
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = +1
Query: 64 MVSKAELTCVYSALILVDDDVAATGEKISTILKAAAVYVEPYWPSLFSKALEGINVLDLI 243
M +KAEL VY++LILVDDDVA TGEKI+TILKAA V VEPYWP LF+KALE INV DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 244 TNIGSEV 264
TNIGS V
Sbjct: 61 TNIGSGV 67
>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
isoform B protein.
Length = 2833
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 193 ANMALHIQPPLSRWWKFSHQLRQHHH 116
AN A+H P H+ RQHHH
Sbjct: 1835 ANPAMHFVSPFKSLENLLHEDRQHHH 1860
>AY060788-1|AAL28336.1| 373|Drosophila melanogaster GH25868p
protein.
Length = 373
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 285 TRGWSSTHFRADVGDQVKDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSCGNII 118
T +S T +R D+ D+ + + F + P+ + Y+ R G+F T+C +II
Sbjct: 289 TNQFSVTRYRKDLSDRERGMPGIF-FSYELSPLMVK-YAERHSSFGHFATNCCSII 342
>AE014296-2491|AAF49653.1| 373|Drosophila melanogaster CG7011-PA
protein.
Length = 373
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -2
Query: 285 TRGWSSTHFRADVGDQVKDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSCGNII 118
T +S T +R D+ D+ + + F + P+ + Y+ R G+F T+C +II
Sbjct: 289 TNQFSVTRYRKDLSDRERGMPGIF-FSYELSPLMVK-YAERHSSFGHFATNCCSII 342
>BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p
protein.
Length = 623
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 30 RPTATCTFKTKNGVKS*INMCLLCSHPGG**CCRNW*ENFHHLESGGCIC 179
RP C + VK N CL C H G W E + + GC C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p
protein.
Length = 623
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 30 RPTATCTFKTKNGVKS*INMCLLCSHPGG**CCRNW*ENFHHLESGGCIC 179
RP C + VK N CL C H G W E + + GC C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p protein.
Length = 1712
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 202 TDLANMALHIQPPLSRWWKFSHQLRQHHH 116
+ ++N +L+++ P K H R+HHH
Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHH 997
>AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA
protein.
Length = 1712
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 202 TDLANMALHIQPPLSRWWKFSHQLRQHHH 116
+ ++N +L+++ P K H R+HHH
Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHH 997
>AE014297-2326|AAF55397.1| 643|Drosophila melanogaster CG5265-PA
protein.
Length = 643
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -2
Query: 270 STHFRADVGDQVKDIDAFQGFGEQTWPIWLYIYSRRFQD 154
STHFR DAF G+G + Y+ R D
Sbjct: 554 STHFRMSTSQVATKYDAFMGYGPSVEDGYACCYNPREHD 592
>AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB,
isoform B protein.
Length = 969
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 30 RPTATCTFKTKNGVKS*INMCLLCSHPGG**CCRNW*ENFHHLESGGCIC 179
RP C + VK N CL C H G W E + + GC C
Sbjct: 909 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 957
>AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA,
isoform A protein.
Length = 989
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +3
Query: 30 RPTATCTFKTKNGVKS*INMCLLCSHPGG**CCRNW*ENFHHLESGGCIC 179
RP C + VK N CL C H G W E + + GC C
Sbjct: 929 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 977
>BT023787-1|AAZ41796.1| 662|Drosophila melanogaster LD01568p
protein.
Length = 662
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 270 STHFRADVGDQVKDIDAFQGFGEQTWPIWLYIYSRRFQD 154
S+HFR DAF G+G T + Y+ R D
Sbjct: 579 SSHFRMSTSQVATKYDAFMGYGPATDDGYACCYNPRDND 617
>AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p
protein.
Length = 1307
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 139 HQLRQHHHPPG*EQSKHMLIQLLTPFLVLNVQVAVGLSS 23
HQL+Q H +Q +H L LT L L + + + ++
Sbjct: 122 HQLQQQHQQSQHQQRRHPLPATLTLLLCLGISLGMAATA 160
>AE014297-453|ABI31145.1| 657|Drosophila melanogaster CG1041-PB,
isoform B protein.
Length = 657
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 270 STHFRADVGDQVKDIDAFQGFGEQTWPIWLYIYSRRFQD 154
S+HFR DAF G+G T + Y+ R D
Sbjct: 574 SSHFRMSTSQVATKYDAFMGYGPATDDGYACCYNPRDND 612
>AE014297-452|AAF54128.2| 662|Drosophila melanogaster CG1041-PA,
isoform A protein.
Length = 662
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 270 STHFRADVGDQVKDIDAFQGFGEQTWPIWLYIYSRRFQD 154
S+HFR DAF G+G T + Y+ R D
Sbjct: 579 SSHFRMSTSQVATKYDAFMGYGPATDDGYACCYNPRDND 617
>AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-PA
protein.
Length = 1307
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 139 HQLRQHHHPPG*EQSKHMLIQLLTPFLVLNVQVAVGLSS 23
HQL+Q H +Q +H L LT L L + + + ++
Sbjct: 122 HQLQQQHQQSQHQQRRHPLPATLTLLLCLGISLGMAATA 160
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,754,669
Number of Sequences: 53049
Number of extensions: 306442
Number of successful extensions: 778
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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