Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2148
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   1.6  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   3.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   3.7  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   3.7  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           21   3.7  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 172 VYVEPYWPSLFSKALEG 222
           +++  +WPS  S ALEG
Sbjct: 218 IFLWLFWPSFNSAALEG 234



 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 209 LENRLGQYGSTYTAAAFKMVEI 144
           L+NR G+Y  TY    ++ V +
Sbjct: 39  LKNRTGRYMFTYLHLLYQDVHV 60


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 153 HLESGGCICR 182
           H E  GCICR
Sbjct: 73  HCEKVGCICR 82


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 261 FRADVGDQVKDIDAFQG 211
           F+A+VG +++   +FQG
Sbjct: 204 FKAEVGSKLRPRSSFQG 220


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 153 HLESGGCICR 182
           H E G CICR
Sbjct: 73  HCEKGVCICR 82


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 153 HLESGGCICR 182
           H E G CICR
Sbjct: 48  HCEKGVCICR 57


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,509
Number of Sequences: 438
Number of extensions: 1655
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)