Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2147
         (404 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA...    28   5.4  

>AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA
           protein.
          Length = 1076

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = +2

Query: 98  FINSLCIIKSTFVHTHAARGVLINKYIFQYNVVGSFKLQKAYMLFVCIAKLLNVRSASEI 277
           F+N LC+  S F   +   G+L    +   N+V    +++   L   I  +   RS  + 
Sbjct: 198 FLNMLCMFLSRFQEYNMRSGILSRYQVVYQNLVFQMAMKEEKALLDSIIPVTLARSLQDA 257

Query: 278 FAQKIK 295
            A  I+
Sbjct: 258 IASHIE 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,557,959
Number of Sequences: 53049
Number of extensions: 312762
Number of successful extensions: 488
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)