Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2147
(404 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 3.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 3.0
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 3.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 4.0
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 4.0
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 4.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.0
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 9.3
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 302 IINKTTYINIVFMHSLNKRFVL 367
+IN +TY+N V SL K F+L
Sbjct: 294 LINASTYLNEVHTASLRK-FIL 314
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 3.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 302 IINKTTYINIVFMHSLNKRFVL 367
+IN +TY+N V SL K F+L
Sbjct: 332 LINASTYLNEVHTASLRK-FIL 352
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 3.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 302 IINKTTYINIVFM 340
++ KTTY+ +VFM
Sbjct: 134 LLGKTTYMQLVFM 146
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 4.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 165 LINTYSNTMLWVVLNYRKLICSLY 236
+I++ SN + NY+KL C+ Y
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNY 104
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 4.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 165 LINTYSNTMLWVVLNYRKLICSLY 236
+I++ SN + NY+KL C+ Y
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNY 104
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 4.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 165 LINTYSNTMLWVVLNYRKLICSLY 236
+I++ SN + NY+KL C+ Y
Sbjct: 81 IISSLSNNYNYNNNNYKKLYCNNY 104
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.0
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 290 IKFLIINKT--TYINIVFMHSLNKRFVLPS 373
I F++ + T + ++F H R+V+PS
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDRYVMPS 293
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.0
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 290 IKFLIINKT--TYINIVFMHSLNKRFVLPS 373
I F++ + T + ++F H R+V+PS
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDRYVMPS 293
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.0
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 290 IKFLIINKT--TYINIVFMHSLNKRFVLPS 373
I F++ + T + ++F H R+V+PS
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDRYVMPS 293
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.0
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 290 IKFLIINKT--TYINIVFMHSLNKRFVLPS 373
I F++ + T + ++F H R+V+PS
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDRYVMPS 293
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.0
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 290 IKFLIINKT--TYINIVFMHSLNKRFVLPS 373
I F++ + T + ++F H R+V+PS
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDRYVMPS 293
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.0
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 290 IKFLIINKT--TYINIVFMHSLNKRFVLPS 373
I F++ + T + ++F H R+V+PS
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDRYVMPS 293
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 102 INYAR*YINKTLTLKH 55
+N+ Y+NK +T KH
Sbjct: 56 LNFNLNYVNKGVTYKH 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,652
Number of Sequences: 438
Number of extensions: 2262
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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