Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2146
(430 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30) 75 3e-14
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 35 0.033
SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10) 34 0.044
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.044
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 32 0.23
SB_7596| Best HMM Match : WD40 (HMM E-Value=7.1e-15) 31 0.41
SB_30771| Best HMM Match : WD40 (HMM E-Value=2e-06) 31 0.54
SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28) 30 0.71
SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18) 30 0.71
SB_9467| Best HMM Match : PAN (HMM E-Value=3e-05) 30 0.71
SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24) 30 0.94
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 29 1.2
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 29 1.2
SB_35567| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 28 2.9
SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_35708| Best HMM Match : WD40 (HMM E-Value=1.2) 28 3.8
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_34542| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 5.0
SB_12391| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 27 5.0
SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16) 27 5.0
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 27 5.0
SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25) 27 5.0
SB_2860| Best HMM Match : IncA (HMM E-Value=0.41) 27 5.0
SB_21242| Best HMM Match : Prog_receptor (HMM E-Value=0.79) 27 6.6
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 27 6.6
SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013) 27 6.6
SB_48252| Best HMM Match : Ribosomal_60s (HMM E-Value=1.1) 27 8.7
SB_43521| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 27 8.7
SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9) 27 8.7
SB_21540| Best HMM Match : fn3 (HMM E-Value=4.3e-30) 27 8.7
SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013) 27 8.7
SB_54074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_17334| Best HMM Match : WD40 (HMM E-Value=3.1e-30)
Length = 1292
Score = 74.5 bits (175), Expect = 3e-14
Identities = 35/58 (60%), Positives = 46/58 (79%)
Frame = +2
Query: 143 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQTLRGHLTKI 316
M+EL+ LRQE+E LK IRDARK A DT+LAQ ++N++ +GRIQM T++TLRG L I
Sbjct: 1 MSELEQLRQESEALKCQIRDARKIAADTTLAQVSANIDQVGRIQMRTRRTLRGGLDNI 58
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 34.7 bits (76), Expect = 0.033
Identities = 14/49 (28%), Positives = 30/49 (61%)
Frame = +2
Query: 272 QMHTQQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGTP 418
Q T L+GH++K+ + + +S+ L+S +DG +++W+ ++ TP
Sbjct: 119 QQGTAFELQGHISKVQALCFAAHSKKLISCGEDGAIMVWDMRIKRKETP 167
>SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10)
Length = 345
Score = 34.3 bits (75), Expect = 0.044
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 227 SLAQATSNLEPIGRIQMHTQQTLRGHLTKIYPMHWGNNSRNLVSAIQ--DGNLILWE 391
++ + LE + M ++ L+GH K+ M W + R+LVS+ Q D ++W+
Sbjct: 199 TVKDVSRKLESLQGCHMKVRRILKGHQGKVLSMDWSGDCRHLVSSSQGCDRAALIWD 255
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 34.3 bits (75), Expect = 0.044
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +1
Query: 166 PGGGNP*KRY*RCEKSGMRHVAGPSHLKPGADRSHTDAHPTNLARSS 306
PGGG P R +RHV P HL G +S+TD + NL+ S
Sbjct: 1289 PGGGRPSPRPSSPRTGHVRHVTSPRHLS-GVSKSNTDYNLHNLSTGS 1334
>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 32.7 bits (71), Expect = 0.13
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 293 LRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
LRGH+ +Y + W + L+S D + I+W+
Sbjct: 176 LRGHIEDVYDLAWSPDGTQLLSGSVDNSAIIWD 208
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 31.9 bits (69), Expect = 0.23
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 167 QEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQTLRGHLTKIYPMHWGNNSR 346
Q +E+L +RDA + C SL + + L P G QTL GH +Y + +
Sbjct: 1017 QLSESLAGLLRDALQP-CVPSLVPSRAFLTPPGG---QLTQTLVGHSKGVYGLAVTADGS 1072
Query: 347 NLVSAIQDGNLILW 388
+VS +DG++ +W
Sbjct: 1073 CVVSGSEDGSVKVW 1086
>SB_7596| Best HMM Match : WD40 (HMM E-Value=7.1e-15)
Length = 291
Score = 31.1 bits (67), Expect = 0.41
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 278 HTQQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPT 403
H TL GH ++++ N R LV+ D L +WE P+
Sbjct: 144 HCFLTLVGHSSEVWSFTLARNERRLVTGCGDSELRVWEVKPS 185
>SB_30771| Best HMM Match : WD40 (HMM E-Value=2e-06)
Length = 229
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 278 HTQQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGTP 418
++Q T + H ++ W +N+ ++ + +DG++ LWE P TP
Sbjct: 5 NSQYTPQAHTDWVFATEWIDNN-HVTTGSRDGSIALWEIPVMCSATP 50
>SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28)
Length = 539
Score = 30.3 bits (65), Expect = 0.71
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 IGRIQMHT-QQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGTP 418
I I+MH +T GH +I + + + R L+S+ D + W+ P + +P
Sbjct: 437 IADIEMHRIVRTFTGHANRITDVSFSPDGRWLISSSMDSTIRTWDLPAARHVSP 490
>SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18)
Length = 1051
Score = 30.3 bits (65), Expect = 0.71
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 199 RCEKSGMRHVAGPSHLKPGA 258
RCE SG H A P+H PGA
Sbjct: 489 RCELSGATHFAFPAHFTPGA 508
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 199 RCEKSGMRHVAGPSHLKPGA 258
+C+ SG H A P+H PGA
Sbjct: 591 QCQLSGATHFAFPAHFTPGA 610
>SB_9467| Best HMM Match : PAN (HMM E-Value=3e-05)
Length = 168
Score = 30.3 bits (65), Expect = 0.71
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 199 RCEKSGMRHVAGPSHLKPGA 258
RCE SG H A P+H PGA
Sbjct: 70 RCELSGATHFAFPAHFTPGA 89
>SB_6763| Best HMM Match : WD40 (HMM E-Value=4.6e-24)
Length = 208
Score = 29.9 bits (64), Expect = 0.94
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 290 TLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
+LRGH+ +Y + W + R + S D L +W+
Sbjct: 96 SLRGHVNCVYQIAWSADCRLICSGSADSTLKVWD 129
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +2
Query: 131 RVLIMNELDS-LRQEAETLKNAIRDARKAACDTSLAQA--TSNLEPIGRIQMHTQQTLRG 301
R+LI D L E E + + I + ++A + + + TL G
Sbjct: 823 RLLIFQGQDGVLTAEGEAMDSKIHSVTFSPRGEAIAVGCESGTISVFNLQEARVMYTLAG 882
Query: 302 HLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
H K+ + NN +++A DG+L +W+
Sbjct: 883 HTNKLRRCMFFNNDTRILTASLDGSLKVWD 912
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 266 RIQMHTQQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPT---QQGTPNP 424
R+ H TL H ++ + W + + L S D + +W +P T G P+P
Sbjct: 458 RVANHKIGTLLNHSQEVCGLKWSPDGKLLASGGNDNVVNIWPYPSTVGSSAGEPSP 513
>SB_35567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 59 RCVACCTCAARGCRSSVPRELCV 127
RC A C C GCR + RE V
Sbjct: 42 RCTAPCVCTQEGCRKTFVREAAV 64
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 245 SNLEPIGRIQMHTQQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILW 388
+N++ +++ Q TL+GH + I+ + + +VSA +D L +W
Sbjct: 442 NNIKVWDLVRLECQATLKGHTSLIWAIAVSRDDSVIVSASKDDLLKVW 489
>SB_18945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 228 DVSHAAFLASLIAFLRVSASWRRLSSSFMINTRVTHSSRGTD--DRQPRAAHVQHATH 61
D +HA F + + + VSAS + + I+ R+ TD RQP A Q + H
Sbjct: 143 DATHAYFASVELGSVDVSASRNKSMINVTISNRLVKVKADTDLIQRQPTAPDAQDSKH 200
>SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +2
Query: 290 TLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQ 409
TL GH I + + +S+ L++A DG++ +++ P++Q
Sbjct: 143 TLEGHAMPIRSLTFSPDSQLLITASDDGHIKMYDVYPSKQ 182
>SB_42321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 195 LEMREKRHATRRWPKPPQTWSRSVAYRCTPNKPCAVISRKSTPCT 329
+ +RE ++ R+ K + W+ V C V+ R STP T
Sbjct: 539 INLRESKNQNRKESKKRKHWNNHVDDYPRKGHACGVMGRPSTPTT 583
>SB_35708| Best HMM Match : WD40 (HMM E-Value=1.2)
Length = 179
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 287 QTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILW 388
QTL GH + + W + L ++ Q G +I+W
Sbjct: 107 QTLEGHTGAVQVVTWNEQFQKLTTSDQYGLIIVW 140
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 411 PCWVGGCSHKIRLPS*MADTKFLELLPQCMG*IFVR*PRKVCWVCI 274
PCWV ++ P M+ + + P CM + VR CWV +
Sbjct: 50 PCWVSVLGVRVACPCCMSLLRVRVVCPCCMSVLHVR-VACPCWVSV 94
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 248 NLEPIGRIQMHTQQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGTP 418
NL P R + +L+ H + + + R LVSA QD I W+ QQG P
Sbjct: 1070 NLAPFSR-----KLSLKEHEYPVQALAFAEEGRCLVSAAQDNCFIAWD---AQQGLP 1118
>SB_34542| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 303
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 113 VEQTIDNRAPRTYNTQRTDPSVSNVPSIDAPAIFGRF 3
VE+T+++R+P YN PS VP ID P + F
Sbjct: 6 VERTVEDRSPPPYNI----PS-GPVPEIDVPTLMPEF 37
>SB_12391| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 187 KRY*RCEKSGMRHVAGPS 240
K+Y C KSG RH GPS
Sbjct: 143 KKYQACMKSGSRHKCGPS 160
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +3
Query: 288 KPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTH-PPNKVHPTPF 428
+PC PC P T RP + H PPN VHP PF
Sbjct: 302 RPCHSPPNTVRPCHS---PPTAVRPCHSPPTAVRPCHSPPNTVHPLPF 346
>SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16)
Length = 657
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 38 GHC*QKDRCVACCTCAARGCRSSVPRELCVT-RVLIMNELDSLRQEAETLKNAIRDARKA 214
G+C +K C C + + RE V+ R + ++L+ L ++A+ L +I+D KA
Sbjct: 33 GNC-EKLTCRDCQLLEHKDHKYQFIRESAVSYREYLRSQLNRLYEQAQPLTESIKDVEKA 91
Query: 215 A 217
A
Sbjct: 92 A 92
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 293 LRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
L GH + + + N R+L+S+ D L++W+
Sbjct: 265 LSGHKAAVQSLAFSRNGRHLISSGVDTRLLVWD 297
>SB_4351| Best HMM Match : zf-B_box (HMM E-Value=1.3e-25)
Length = 662
Score = 27.5 bits (58), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 38 GHC*QKDRCVACCTCAARGCRSSVPRELCVT-RVLIMNELDSLRQEAETLKNAIRDARKA 214
G+C +K C C + + RE V+ R + ++L+ L ++A+ L +I+D KA
Sbjct: 196 GNC-EKLTCRDCQLLEHKDHKYQFIRESAVSYREYLRSQLNRLYEQAQPLTESIKDVEKA 254
Query: 215 A 217
A
Sbjct: 255 A 255
>SB_2860| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 417
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/67 (28%), Positives = 28/67 (41%)
Frame = +2
Query: 113 RELCVTRVLIMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQT 292
REL V + +ELD LR E L+ + + K+ Q L + +I+ Q
Sbjct: 225 RELSKPEVKLQSELDFLRVEKAELERKLESSNKSKIHYK-QQWGRALREVAKIKQQEQTV 283
Query: 293 LRGHLTK 313
R L K
Sbjct: 284 ARARLKK 290
>SB_21242| Best HMM Match : Prog_receptor (HMM E-Value=0.79)
Length = 1091
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 140 IMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEP 259
I +ELD + AE L + R+ R + + +Q+T+NL P
Sbjct: 198 IGSELDMRAKSAEDLNHINRERRVLSGPNTRSQSTANLRP 237
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 22 GASIEGTLLTEGSVRCVL--YVRG-ARLSIVCST*AVCDACINHERAGQPTP 168
G S+E TL+ G +RC + G L + C+ V +AC+ RA + TP
Sbjct: 662 GCSVEATLVQTGVLRCFCPPHEPGLVTLQVACNGFIVSNACVFEYRA-RDTP 712
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 140 IMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEP 259
I +ELD + AE L + R+ R + + +Q+T+NL P
Sbjct: 1923 IGSELDMRAKSAEDLNHINRERRVLSGPNTRSQSTANLRP 1962
>SB_4140| Best HMM Match : ANF_receptor (HMM E-Value=0.013)
Length = 472
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 234 ASDVSHAAFLASLIAFLRVSASWRRLSSSFMINTRVTHSSRGTDD 100
ASDV A+ LA LI + +WRR+S RG DD
Sbjct: 321 ASDVHQASALADLITYF----NWRRVSLPLTRRFLYATQPRGVDD 361
>SB_48252| Best HMM Match : Ribosomal_60s (HMM E-Value=1.1)
Length = 937
Score = 26.6 bits (56), Expect = 8.7
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = -2
Query: 240 AW-ASDVSHAAFLASLIAFLRVSASWRRLSSSFM----INTRVT--HSSRGTDDRQPRAA 82
AW AS V A L L++ + R L+++F +N R T H++ GTDD P A
Sbjct: 758 AWSASSVIGVAGL--LVSLFGLYTRRRELAAAFTRTPAVNQRATDPHATEGTDDVTPPAR 815
Query: 81 HVQHATHR 58
A HR
Sbjct: 816 PPLAAAHR 823
>SB_43521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 199 RCEKSGMRHVAGPSHLKPGADRSHTDAHPTNLARSSH 309
RCE + H++ P L+P A+ + P N + H
Sbjct: 3 RCELNAATHLSHPQMLRPEANAFYALIKPPNRCSNKH 39
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 299 GHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
GH + I H SR L+S D LI+W+
Sbjct: 79 GHTSIITSCHPNTTSRKLISGGWDKTLIMWD 109
>SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 251 LEPIGRIQMHTQQTLRGHLTKIYPMHWGNNSRNLV-SAIQDGNLILWEHP 397
L G+I Q + GH + + W N++ SA +D ++ +W P
Sbjct: 68 LSQTGKIDPFNQPKVNGHTRPVLDLGWNPFDDNVIASASEDCSIKIWYIP 117
>SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9)
Length = 285
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 317 YPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGT 415
Y +H+G N+ + N I+W +PP + T
Sbjct: 202 YTLHYGPNTNTRKRKNRQRNNIIWYNPPFSKNT 234
>SB_21540| Best HMM Match : fn3 (HMM E-Value=4.3e-30)
Length = 634
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 401 WVGVPTR*GYHLEWPTP 351
W GVP GYHLEW P
Sbjct: 337 WNGVPA--GYHLEWIDP 351
>SB_15317| Best HMM Match : Pox_A32 (HMM E-Value=0.013)
Length = 1124
Score = 26.6 bits (56), Expect = 8.7
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = -2
Query: 240 AW-ASDVSHAAFLASLIAFLRVSASWRRLSSSFM----INTRVT--HSSRGTDDRQPRAA 82
AW AS V A L L++ + R L+++F +N R T H++ GTDD P A
Sbjct: 874 AWSASSVIGVAGL--LVSLFGLYTRRRELAAAFTRTPAVNQRATDPHATEGTDDVTPPAR 931
Query: 81 HVQHATHR 58
A HR
Sbjct: 932 PPLAAAHR 939
>SB_54074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 80 CAARGCRSSVPRELCVTRVLIMNELDSLRQEAETLKNAIRDARKAACDT 226
CA + +EL ++ E D L + E+ K + KAACDT
Sbjct: 318 CAFARSLDKIIQELGAEQIHKCGEGDELAGQEESFKTWAKQVFKAACDT 366
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 299 GHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
GH ++ W N + S+ DG + LWE
Sbjct: 86 GHDDRVKSCAWSPNGEYVASSSADGRVTLWE 116
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 287 QTLRGHLTKIYPMHWGNNSRNL-VSAIQDGNLILWE 391
+TL+GH + + ++L +SA +DG+++LW+
Sbjct: 123 RTLKGHSDFVLGVDCSGTEKDLFLSASRDGSVVLWD 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,551,183
Number of Sequences: 59808
Number of extensions: 387784
Number of successful extensions: 1655
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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