Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2146
(430 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 127 3e-30
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 127 3e-30
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 127 3e-30
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 59 2e-09
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 32 0.20
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 31 0.27
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 31 0.27
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 30 0.61
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 30 0.61
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 30 0.61
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 29 1.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 28 2.5
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 27 4.3
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 27 4.3
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 27 4.3
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 27 5.7
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 27 5.7
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 27 5.7
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 27 7.5
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 26 10.0
U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine rec... 26 10.0
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 26 10.0
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 127 bits (307), Expect = 3e-30
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +2
Query: 143 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQTLRGHLTKIYP 322
M+ELD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQM T++TLRGHL KIY
Sbjct: 1 MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60
Query: 323 MHWGNNSRNLVSAIQDGNLILWEHPPTQQ 409
MHW ++SRNLVSA QDG LI+W+ T +
Sbjct: 61 MHWASDSRNLVSASQDGKLIVWDSYTTNK 89
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 127 bits (307), Expect = 3e-30
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +2
Query: 143 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQTLRGHLTKIYP 322
M+ELD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQM T++TLRGHL KIY
Sbjct: 1 MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60
Query: 323 MHWGNNSRNLVSAIQDGNLILWEHPPTQQ 409
MHW ++SRNLVSA QDG LI+W+ T +
Sbjct: 61 MHWASDSRNLVSASQDGKLIVWDSYTTNK 89
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 127 bits (307), Expect = 3e-30
Identities = 60/89 (67%), Positives = 72/89 (80%)
Frame = +2
Query: 143 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQTLRGHLTKIYP 322
M+ELD LRQEAE LK+ IR+ARK+A DT+LA SNLEPIGRIQM T++TLRGHL KIY
Sbjct: 1 MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60
Query: 323 MHWGNNSRNLVSAIQDGNLILWEHPPTQQ 409
MHW ++SRNLVSA QDG LI+W+ T +
Sbjct: 61 MHWASDSRNLVSASQDGKLIVWDSYTTNK 89
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +2
Query: 152 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQTLRGHLTKIYPMHW 331
L+ L EAE L+ + R D + QA L+ +G + + ++ L+GH+ K+ M W
Sbjct: 17 LEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDW 76
Query: 332 GNNSRNLVSAIQDGNLILWE 391
+ R++VS+ QDG +I+W+
Sbjct: 77 SLDKRHIVSSSQDGKVIVWD 96
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +2
Query: 152 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMHTQQTLRGHLTKIYPMHW 331
L+ L EAE L+ + R D + QA L+ +G + + ++ L+GH+ K+ M W
Sbjct: 17 LEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDW 76
Query: 332 GNNSRNLVSAIQDGNLILWE 391
+ R++VS+ QDG +I+W+
Sbjct: 77 SLDKRHIVSSSQDGKVIVWD 96
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 31.9 bits (69), Expect = 0.20
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 290 TLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
+LRGH+ +Y + W +SR LVS D L ++E
Sbjct: 397 SLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFE 430
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 320 PMHWGNNSRNLVSAIQDGNLILWEHPPTQQGT 415
PMH R L S +DGN+ +W+ T QGT
Sbjct: 200 PMHKDPTCRLLASCGKDGNIFIWD---TVQGT 228
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 287 QTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILW 388
QTL+GH +Y + W +N S D +ILW
Sbjct: 54 QTLKGHKDLVYTVAWSHNGELFASGGADKLVILW 87
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 287 QTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILW 388
QTL+GH +Y + W +N S D +ILW
Sbjct: 54 QTLKGHKDLVYTVAWSHNGELFASGGADKLVILW 87
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.3 bits (65), Expect = 0.61
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 287 QTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
+TL GH I+ + + +++ LVSA D + LWE
Sbjct: 460 ETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLWE 494
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 30.3 bits (65), Expect = 0.61
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 287 QTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
+TL GH I+ + + +++ LVSA D + LWE
Sbjct: 460 ETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLWE 494
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 30.3 bits (65), Expect = 0.61
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +3
Query: 243 PQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PNKVH 416
P T + + TP P + KSTP T T+ T P T+ T P P +
Sbjct: 260 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMK 319
Query: 417 PTP 425
TP
Sbjct: 320 STP 322
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +3
Query: 243 PQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHPPN-KVHP 419
P T + + TP P + KSTP T T+ T P T+ T P K P
Sbjct: 374 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTP 433
Query: 420 T 422
T
Sbjct: 434 T 434
Score = 28.3 bits (60), Expect = 2.5
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 207 EKRHATRRWPKPPQ-TWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLS 383
+ R AT+ P + T + + TP P + S +TP T T+ T P T+
Sbjct: 146 DSRWATKPTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMK 205
Query: 384 CGNTHP--PNKVHPTP 425
T P P + TP
Sbjct: 206 STPTTPTTPTTMKSTP 221
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +3
Query: 243 PQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PNKVH 416
P T + + TP P + S +TP T T+ T P T+ T P P +
Sbjct: 273 PTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMK 332
Query: 417 PTP 425
TP
Sbjct: 333 STP 335
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 182 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 241
Query: 408 KVHPTP 425
+ TP
Sbjct: 242 TMKSTP 247
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 195 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 254
Query: 408 KVHPTP 425
+ TP
Sbjct: 255 TMKSTP 260
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 208 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 267
Query: 408 KVHPTP 425
+ TP
Sbjct: 268 TMKSTP 273
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 221 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 280
Query: 408 KVHPTP 425
+ TP
Sbjct: 281 TMKSTP 286
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 296 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 355
Query: 408 KVHPTP 425
+ TP
Sbjct: 356 TMKSTP 361
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 309 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 368
Query: 408 KVHPTP 425
+ TP
Sbjct: 369 TMKSTP 374
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 322 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 381
Query: 408 KVHPTP 425
+ TP
Sbjct: 382 TMKSTP 387
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHP--PN 407
P P T + + TP P + S +TP T T+ T P T+ T P P
Sbjct: 335 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 394
Query: 408 KVHPTP 425
+ TP
Sbjct: 395 TMKSTP 400
Score = 26.6 bits (56), Expect = 7.5
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHPPN-K 410
P P T + + TP P + S +TP T T+ T P T+ T P K
Sbjct: 234 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMK 293
Query: 411 VHPT 422
PT
Sbjct: 294 STPT 297
Score = 26.6 bits (56), Expect = 7.5
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +3
Query: 234 PKPPQTWSRSVAYRCTPNKPCAVISRKSTPCTGATIPETWCRPFKMVTLSCGNTHPPN-K 410
P P T + + TP P + S +TP T T+ T P T+ T P K
Sbjct: 348 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMK 407
Query: 411 VHPT 422
PT
Sbjct: 408 STPT 411
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 275 MHTQQTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
M ++TL GH + + W ++SR +VSA D L ++E
Sbjct: 119 MICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFE 157
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +2
Query: 293 LRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGTPNPF 427
L+GH + W +VS+ DG +W Q+G P+
Sbjct: 439 LKGHTAVVRECDWHPTENEIVSSAWDGVTTVWTWDERQEGVIAPY 483
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +2
Query: 293 LRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGTPNPF 427
L+GH + W +VS+ DG +W Q+G P+
Sbjct: 480 LKGHTAVVRECDWHPTENEIVSSAWDGVTTVWTWDERQEGVIAPY 524
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 290 TLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILW 388
TL H + + WG + +VS QD N +W
Sbjct: 53 TLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVW 85
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 302 HLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
H + +H+ N+R V+A +DG++ +W+
Sbjct: 258 HTESVTDVHYSENARLYVTASKDGHVKIWD 287
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Frame = +3
Query: 153 WTAYARRRK------PLKTLLEMREKRHATRRWPKPPQTWSRSVAYRCTPNKPCAVISRK 314
WTA+ +K LKT + R K +TR +PP + V + P +
Sbjct: 30 WTAHVNGKKHRDSIEKLKTSAQKRGKESSTRNTDEPPNKKQKEVPNQGPTTLPTDFFDDE 89
Query: 315 STP 323
STP
Sbjct: 90 STP 92
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
protein C54G7.4 protein.
Length = 1199
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 287 QTLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILW 388
Q L GH + W N++ L ++ G +I+W
Sbjct: 63 QALEGHNATVMNATWNENNQKLTTSDTSGLIIVW 96
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 293 LRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
++GH ++ W N+ R L++A D I+W+
Sbjct: 283 MQGHDDWVHSTVWSNDGRVLLTASSDKTCIIWK 315
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 207 EKRHATRRWPKPPQTWSRSVAYRCTPNKPCAVIS 308
+K A+R PP T SV + TP PC S
Sbjct: 152 QKTLASRSTSVPPSTIPSSVCFLSTPTTPCLQFS 185
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 207 EKRHATRRWPKPPQTWSRSVAYRCTPNKPCAVIS 308
+K A+R PP T SV + TP PC S
Sbjct: 123 QKTLASRSTSVPPSTIPSSVCFLSTPTTPCLQFS 156
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 207 EKRHATRRWPKPPQTWSRSVAYRCTPNKPCAVIS 308
+K A+R PP T SV + TP PC S
Sbjct: 152 QKTLASRSTSVPPSTIPSSVCFLSTPTTPCLQFS 185
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical protein
F20D12.2 protein.
Length = 1116
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 153 WTAYARRRKPLKTLLEMREKR 215
W +Y ++RK LK + E ++KR
Sbjct: 942 WKSYTKKRKALKRIAEEKQKR 962
>Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical
protein T22G5.5 protein.
Length = 512
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 314 IYPMHWGNNSRNLVSAIQDGNLIL 385
++PM + NS N+ S + G+LIL
Sbjct: 200 VFPMGFATNSMNIPSLVDKGSLIL 223
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 284 QQTLRGHLTKIYPMHWGNNSR-NLVSAIQDGNLILWE 391
Q L+GH + Y M W N +L++A DG + W+
Sbjct: 164 QLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWD 200
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 255 SRSVAYRCTPNKPCAVISRKSTPCTGATIPE 347
S SV P P +V + STPC ++PE
Sbjct: 1015 SSSVQVMKPPRSPSSVSCKLSTPCVEQSLPE 1045
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 255 SRSVAYRCTPNKPCAVISRKSTPCTGATIPE 347
S SV P P +V + STPC ++PE
Sbjct: 1001 SSSVQVMKPPRSPSSVSCKLSTPCVEQSLPE 1031
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +2
Query: 290 TLRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
++ H KI+ + +N V+A DG +++W+
Sbjct: 602 SIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVWK 635
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 26.2 bits (55), Expect = 10.0
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 293 LRGHLTKIYPMHWGNNSRNLVSAIQDGNLILWE 391
L GH +I+ + W N +++ D ++ +W+
Sbjct: 376 LDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWD 408
>U39472-11|AAP86619.2| 355|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 34 protein.
Length = 355
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 168 RRRKPLKTLLEMREKRHATRRWPKPPQTWSRSVAYRCTPNKPCAVISRKST 320
+RR+ + L + + + + K ++WS+ R PN P V+ S+
Sbjct: 305 QRREKINGLTKENQNENQKSYFDKLDRSWSQGYGNRYAPNVPAPVVCINSS 355
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 296 RGHLTKIYPMHWGNNSRNLVSAIQDGNLILWEHPPTQQGTP 418
+ H + + + W + +VS DG L +W Q G P
Sbjct: 319 KAHESDVNVISWNRHENLIVSGGDDGELKIWSLKTIQFGQP 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,660,834
Number of Sequences: 27780
Number of extensions: 267623
Number of successful extensions: 982
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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